Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC47A1Q96FL8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC47A1Q96FL8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC47A1Q96FL8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC47A1Q96FL8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SLC47A1Q96FL8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC47A1Q96FL8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC47A1Q96FL8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC47A1Q96FL8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC47A1Q96FL8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC47A1Q96FL8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SLC47A1Q96FL8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.57■■□□□ 1.36
SLC47A1Q96FL8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC47A1Q96FL8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC47A1Q96FL8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC47A1Q96FL8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC47A1Q96FL8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC47A1Q96FL8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC47A1Q96FL8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.56■■□□□ 1.36
SLC47A1Q96FL8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC47A1Q96FL8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC47A1Q96FL8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC47A1Q96FL8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC47A1Q96FL8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SLC47A1Q96FL8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SLC47A1Q96FL8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC47A1Q96FL8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SLC47A1Q96FL8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.52■■□□□ 1.36
SLC47A1Q96FL8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC47A1Q96FL8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC47A1Q96FL8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.52■■□□□ 1.36
SLC47A1Q96FL8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.52■■□□□ 1.36
SLC47A1Q96FL8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.52■■□□□ 1.36
SLC47A1Q96FL8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
SLC47A1Q96FL8 AC018358.1-201ENST00000631079 1402 ntBASIC23.51■■□□□ 1.35
SLC47A1Q96FL8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC47A1Q96FL8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
SLC47A1Q96FL8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC47A1Q96FL8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC47A1Q96FL8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC47A1Q96FL8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC47A1Q96FL8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC47A1Q96FL8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.49■■□□□ 1.35
SLC47A1Q96FL8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SLC47A1Q96FL8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC47A1Q96FL8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SLC47A1Q96FL8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 AC108673.1-201ENST00000510422 1159 ntBASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 MIR3665-201ENST00000578708 105 ntBASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 AC145676.1-201ENST00000514988 2004 ntBASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC47A1Q96FL8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.47■■□□□ 1.35
SLC47A1Q96FL8 DUX4L28-201ENST00000623687 678 ntBASIC23.47■■□□□ 1.35
SLC47A1Q96FL8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
SLC47A1Q96FL8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC47A1Q96FL8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SLC47A1Q96FL8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SLC47A1Q96FL8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.45■■□□□ 1.35
SLC47A1Q96FL8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC47A1Q96FL8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC47A1Q96FL8 AP006261.1-201ENST00000584783 668 ntBASIC23.45■■□□□ 1.34
SLC47A1Q96FL8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SLC47A1Q96FL8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
SLC47A1Q96FL8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
SLC47A1Q96FL8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SLC47A1Q96FL8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SLC47A1Q96FL8 AC020928.2-201ENST00000588717 2197 ntBASIC23.41■■□□□ 1.34
SLC47A1Q96FL8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC47A1Q96FL8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC47A1Q96FL8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SLC47A1Q96FL8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.39■■□□□ 1.34
SLC47A1Q96FL8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SLC47A1Q96FL8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.39■■□□□ 1.33
SLC47A1Q96FL8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms