Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ATP6V0A1Q93050 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
ATP6V0A1Q93050 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.37■■■□□ 2.13
ATP6V0A1Q93050 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.37■■■□□ 2.13
ATP6V0A1Q93050 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.37■■■□□ 2.13
ATP6V0A1Q93050 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ATP6V0A1Q93050 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
ATP6V0A1Q93050 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
ATP6V0A1Q93050 AC148477.6-201ENST00000623746 465 ntBASIC28.36■■■□□ 2.13
ATP6V0A1Q93050 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.36■■■□□ 2.13
ATP6V0A1Q93050 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.35■■■□□ 2.13
ATP6V0A1Q93050 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V0A1Q93050 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ATP6V0A1Q93050 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.34■■■□□ 2.13
ATP6V0A1Q93050 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.34■■■□□ 2.13
ATP6V0A1Q93050 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
ATP6V0A1Q93050 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
ATP6V0A1Q93050 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V0A1Q93050 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
ATP6V0A1Q93050 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V0A1Q93050 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V0A1Q93050 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V0A1Q93050 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.31■■■□□ 2.12
ATP6V0A1Q93050 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ATP6V0A1Q93050 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
ATP6V0A1Q93050 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATP6V0A1Q93050 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATP6V0A1Q93050 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.29■■■□□ 2.12
ATP6V0A1Q93050 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V0A1Q93050 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V0A1Q93050 MIR219A2-201ENST00000608502 1504 ntBASIC28.28■■■□□ 2.12
ATP6V0A1Q93050 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V0A1Q93050 AP002414.2-202ENST00000590929 1450 ntBASIC28.27■■■□□ 2.12
ATP6V0A1Q93050 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
ATP6V0A1Q93050 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ATP6V0A1Q93050 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V0A1Q93050 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V0A1Q93050 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
ATP6V0A1Q93050 AC060814.1-201ENST00000554326 538 ntBASIC28.26■■■□□ 2.11
ATP6V0A1Q93050 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.26■■■□□ 2.11
ATP6V0A1Q93050 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
ATP6V0A1Q93050 NTF6A-201ENST00000591175 560 ntBASIC28.25■■■□□ 2.11
ATP6V0A1Q93050 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.25■■■□□ 2.11
ATP6V0A1Q93050 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A1Q93050 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A1Q93050 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A1Q93050 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
ATP6V0A1Q93050 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
ATP6V0A1Q93050 AC139426.1-201ENST00000568218 2529 ntBASIC28.24■■■□□ 2.11
ATP6V0A1Q93050 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A1Q93050 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
ATP6V0A1Q93050 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ATP6V0A1Q93050 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
ATP6V0A1Q93050 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A1Q93050 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A1Q93050 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
ATP6V0A1Q93050 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A1Q93050 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A1Q93050 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A1Q93050 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A1Q93050 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V0A1Q93050 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V0A1Q93050 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
ATP6V0A1Q93050 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V0A1Q93050 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V0A1Q93050 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ATP6V0A1Q93050 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V0A1Q93050 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.2■■■□□ 2.1
ATP6V0A1Q93050 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V0A1Q93050 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.2■■■□□ 2.1
ATP6V0A1Q93050 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
ATP6V0A1Q93050 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.19■■■□□ 2.1
ATP6V0A1Q93050 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V0A1Q93050 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V0A1Q93050 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V0A1Q93050 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ATP6V0A1Q93050 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP6V0A1Q93050 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP6V0A1Q93050 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V0A1Q93050 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V0A1Q93050 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V0A1Q93050 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.16■■■□□ 2.1
ATP6V0A1Q93050 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V0A1Q93050 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V0A1Q93050 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.15■■■□□ 2.1
ATP6V0A1Q93050 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V0A1Q93050 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.13■■■□□ 2.09
ATP6V0A1Q93050 AC012354.3-201ENST00000623734 483 ntBASIC28.13■■■□□ 2.09
ATP6V0A1Q93050 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP6V0A1Q93050 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATP6V0A1Q93050 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
ATP6V0A1Q93050 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
ATP6V0A1Q93050 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATP6V0A1Q93050 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.11■■■□□ 2.09
ATP6V0A1Q93050 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.11■■■□□ 2.09
ATP6V0A1Q93050 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.11■■■□□ 2.09
ATP6V0A1Q93050 AC092296.2-201ENST00000589470 999 ntBASIC28.11■■■□□ 2.09
ATP6V0A1Q93050 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ATP6V0A1Q93050 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.11■■■□□ 2.09
ATP6V0A1Q93050 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms