Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.72■■■□□ 2.03
TMEM40Q8WWA1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
TMEM40Q8WWA1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
TMEM40Q8WWA1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.7■■■□□ 2.02
TMEM40Q8WWA1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 U85056.1-201ENST00000616429 682 ntBASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TMEM40Q8WWA1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.67■■■□□ 2.02
TMEM40Q8WWA1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.67■■■□□ 2.02
TMEM40Q8WWA1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 AL157400.5-201ENST00000507624 621 ntBASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
TMEM40Q8WWA1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TMEM40Q8WWA1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
TMEM40Q8WWA1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 ECEL1P2-201ENST00000461596 1295 ntBASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TMEM40Q8WWA1 AC126177.7-201ENST00000547904 679 ntBASIC27.62■■■□□ 2.01
TMEM40Q8WWA1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TMEM40Q8WWA1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.61■■■□□ 2.01
TMEM40Q8WWA1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.61■■■□□ 2.01
TMEM40Q8WWA1 AC012354.3-201ENST00000623734 483 ntBASIC27.61■■■□□ 2.01
TMEM40Q8WWA1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TMEM40Q8WWA1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TMEM40Q8WWA1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.6■■■□□ 2.01
TMEM40Q8WWA1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.58■■■□□ 2.01
TMEM40Q8WWA1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TMEM40Q8WWA1 AC018358.1-201ENST00000631079 1402 ntBASIC27.58■■■□□ 2
TMEM40Q8WWA1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.57■■■□□ 2
TMEM40Q8WWA1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM40Q8WWA1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM40Q8WWA1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.57■■■□□ 2
TMEM40Q8WWA1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM40Q8WWA1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM40Q8WWA1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.56■■■□□ 2
TMEM40Q8WWA1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM40Q8WWA1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM40Q8WWA1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
TMEM40Q8WWA1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMEM40Q8WWA1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 AL359258.2-201ENST00000564063 1566 ntBASIC27.53■■■□□ 2
TMEM40Q8WWA1 AP002414.2-202ENST00000590929 1450 ntBASIC27.53■■■□□ 2
TMEM40Q8WWA1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 KRT18P60-201ENST00000312876 1297 ntBASIC27.52■■■□□ 2
TMEM40Q8WWA1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.52■■■□□ 2
TMEM40Q8WWA1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMEM40Q8WWA1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 AL033527.3-201ENST00000566366 1196 ntBASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms