Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.73■■■□□ 2.03
TMEM40Q8WWA1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.72■■■□□ 2.03
TMEM40Q8WWA1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.71■■■□□ 2.03
TMEM40Q8WWA1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
TMEM40Q8WWA1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
TMEM40Q8WWA1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.7■■■□□ 2.02
TMEM40Q8WWA1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.69■■■□□ 2.02
TMEM40Q8WWA1 U85056.1-201ENST00000616429 682 ntBASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM40Q8WWA1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TMEM40Q8WWA1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.67■■■□□ 2.02
TMEM40Q8WWA1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.67■■■□□ 2.02
TMEM40Q8WWA1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 AL157400.5-201ENST00000507624 621 ntBASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM40Q8WWA1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM40Q8WWA1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
TMEM40Q8WWA1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TMEM40Q8WWA1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
TMEM40Q8WWA1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 ECEL1P2-201ENST00000461596 1295 ntBASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM40Q8WWA1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TMEM40Q8WWA1 AC126177.7-201ENST00000547904 679 ntBASIC27.62■■■□□ 2.01
TMEM40Q8WWA1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TMEM40Q8WWA1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.61■■■□□ 2.01
TMEM40Q8WWA1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.61■■■□□ 2.01
TMEM40Q8WWA1 AC012354.3-201ENST00000623734 483 ntBASIC27.61■■■□□ 2.01
TMEM40Q8WWA1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TMEM40Q8WWA1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TMEM40Q8WWA1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.6■■■□□ 2.01
TMEM40Q8WWA1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TMEM40Q8WWA1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.58■■■□□ 2.01
TMEM40Q8WWA1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TMEM40Q8WWA1 AC018358.1-201ENST00000631079 1402 ntBASIC27.58■■■□□ 2
TMEM40Q8WWA1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.57■■■□□ 2
TMEM40Q8WWA1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM40Q8WWA1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM40Q8WWA1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.57■■■□□ 2
TMEM40Q8WWA1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMEM40Q8WWA1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM40Q8WWA1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.56■■■□□ 2
TMEM40Q8WWA1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM40Q8WWA1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMEM40Q8WWA1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
TMEM40Q8WWA1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMEM40Q8WWA1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMEM40Q8WWA1 AL359258.2-201ENST00000564063 1566 ntBASIC27.53■■■□□ 2
TMEM40Q8WWA1 AP002414.2-202ENST00000590929 1450 ntBASIC27.53■■■□□ 2
TMEM40Q8WWA1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 KRT18P60-201ENST00000312876 1297 ntBASIC27.52■■■□□ 2
TMEM40Q8WWA1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.52■■■□□ 2
TMEM40Q8WWA1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
TMEM40Q8WWA1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMEM40Q8WWA1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 AL033527.3-201ENST00000566366 1196 ntBASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMEM40Q8WWA1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms