Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.03■■■□□ 2.72
CARMIL3Q8ND23 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CARMIL3Q8ND23 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CARMIL3Q8ND23 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CARMIL3Q8ND23 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CARMIL3Q8ND23 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CARMIL3Q8ND23 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CARMIL3Q8ND23 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CARMIL3Q8ND23 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32■■■□□ 2.71
CARMIL3Q8ND23 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CARMIL3Q8ND23 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CARMIL3Q8ND23 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CARMIL3Q8ND23 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.97■■■□□ 2.71
CARMIL3Q8ND23 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.96■■■□□ 2.71
CARMIL3Q8ND23 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CARMIL3Q8ND23 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.96■■■□□ 2.71
CARMIL3Q8ND23 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.96■■■□□ 2.71
CARMIL3Q8ND23 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CARMIL3Q8ND23 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.94■■■□□ 2.7
CARMIL3Q8ND23 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.94■■■□□ 2.7
CARMIL3Q8ND23 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CARMIL3Q8ND23 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CARMIL3Q8ND23 AC007029.1-201ENST00000604183 313 ntBASIC31.93■■■□□ 2.7
CARMIL3Q8ND23 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CARMIL3Q8ND23 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
CARMIL3Q8ND23 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.92■■■□□ 2.7
CARMIL3Q8ND23 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CARMIL3Q8ND23 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.92■■■□□ 2.7
CARMIL3Q8ND23 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.92■■■□□ 2.7
CARMIL3Q8ND23 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CARMIL3Q8ND23 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CARMIL3Q8ND23 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CARMIL3Q8ND23 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CARMIL3Q8ND23 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.9■■■□□ 2.7
CARMIL3Q8ND23 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CARMIL3Q8ND23 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
CARMIL3Q8ND23 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CARMIL3Q8ND23 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.87■■■□□ 2.69
CARMIL3Q8ND23 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.87■■■□□ 2.69
CARMIL3Q8ND23 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CARMIL3Q8ND23 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CARMIL3Q8ND23 AC129492.7-201ENST00000622992 756 ntBASIC31.87■■■□□ 2.69
CARMIL3Q8ND23 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CARMIL3Q8ND23 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CARMIL3Q8ND23 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.86■■■□□ 2.69
CARMIL3Q8ND23 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.86■■■□□ 2.69
CARMIL3Q8ND23 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CARMIL3Q8ND23 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.85■■■□□ 2.69
CARMIL3Q8ND23 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
CARMIL3Q8ND23 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.85■■■□□ 2.69
CARMIL3Q8ND23 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CARMIL3Q8ND23 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.82■■■□□ 2.69
CARMIL3Q8ND23 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.82■■■□□ 2.69
CARMIL3Q8ND23 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
CARMIL3Q8ND23 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CARMIL3Q8ND23 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.81■■■□□ 2.68
CARMIL3Q8ND23 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CARMIL3Q8ND23 AL592293.1-201ENST00000502889 1188 ntBASIC31.81■■■□□ 2.68
CARMIL3Q8ND23 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CARMIL3Q8ND23 AC009831.1-201ENST00000580420 1582 ntBASIC31.81■■■□□ 2.68
CARMIL3Q8ND23 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CARMIL3Q8ND23 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CARMIL3Q8ND23 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CARMIL3Q8ND23 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
CARMIL3Q8ND23 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CARMIL3Q8ND23 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CARMIL3Q8ND23 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CARMIL3Q8ND23 DUX4L18-201ENST00000553347 1267 ntBASIC31.78■■■□□ 2.68
CARMIL3Q8ND23 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.78■■■□□ 2.68
CARMIL3Q8ND23 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.78■■■□□ 2.68
CARMIL3Q8ND23 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CARMIL3Q8ND23 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.77■■■□□ 2.68
CARMIL3Q8ND23 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CARMIL3Q8ND23 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.77■■■□□ 2.68
CARMIL3Q8ND23 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
CARMIL3Q8ND23 AP004833.2-201ENST00000532228 1454 ntBASIC31.77■■■□□ 2.68
CARMIL3Q8ND23 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 AL451085.2-201ENST00000605085 799 ntBASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 AC133552.2-201ENST00000619106 1032 ntBASIC31.76■■■□□ 2.67
CARMIL3Q8ND23 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CARMIL3Q8ND23 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.75■■■□□ 2.67
CARMIL3Q8ND23 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CARMIL3Q8ND23 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
CARMIL3Q8ND23 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CARMIL3Q8ND23 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.74■■■□□ 2.67
CARMIL3Q8ND23 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CARMIL3Q8ND23 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CARMIL3Q8ND23 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CARMIL3Q8ND23 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CARMIL3Q8ND23 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CARMIL3Q8ND23 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CARMIL3Q8ND23 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.72■■■□□ 2.67
CARMIL3Q8ND23 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CARMIL3Q8ND23 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.72■■■□□ 2.67
CARMIL3Q8ND23 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms