Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC71LQ8N9Z2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71LQ8N9Z2 AC018358.1-201ENST00000631079 1402 ntBASIC20.82■□□□□ 0.92
CCDC71LQ8N9Z2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71LQ8N9Z2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC71LQ8N9Z2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71LQ8N9Z2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC71LQ8N9Z2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71LQ8N9Z2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC71LQ8N9Z2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC71LQ8N9Z2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC71LQ8N9Z2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC71LQ8N9Z2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC71LQ8N9Z2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC71LQ8N9Z2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC71LQ8N9Z2 AC145676.1-201ENST00000514988 2004 ntBASIC20.79■□□□□ 0.92
CCDC71LQ8N9Z2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC71LQ8N9Z2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC71LQ8N9Z2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC71LQ8N9Z2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71LQ8N9Z2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC71LQ8N9Z2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC71LQ8N9Z2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC71LQ8N9Z2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CCDC71LQ8N9Z2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC71LQ8N9Z2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71LQ8N9Z2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71LQ8N9Z2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC71LQ8N9Z2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC71LQ8N9Z2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC71LQ8N9Z2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC71LQ8N9Z2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC71LQ8N9Z2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC71LQ8N9Z2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC71LQ8N9Z2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC71LQ8N9Z2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC71LQ8N9Z2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC71LQ8N9Z2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC71LQ8N9Z2 AL391121.1-201ENST00000607967 1349 ntBASIC20.74■□□□□ 0.91
CCDC71LQ8N9Z2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC71LQ8N9Z2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC71LQ8N9Z2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC71LQ8N9Z2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC71LQ8N9Z2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71LQ8N9Z2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71LQ8N9Z2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC71LQ8N9Z2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71LQ8N9Z2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC71LQ8N9Z2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC71LQ8N9Z2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC71LQ8N9Z2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC71LQ8N9Z2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC71LQ8N9Z2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71LQ8N9Z2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC71LQ8N9Z2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC71LQ8N9Z2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC71LQ8N9Z2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC71LQ8N9Z2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC71LQ8N9Z2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC71LQ8N9Z2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC71LQ8N9Z2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC71LQ8N9Z2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71LQ8N9Z2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71LQ8N9Z2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71LQ8N9Z2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC71LQ8N9Z2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC71LQ8N9Z2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC71LQ8N9Z2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC71LQ8N9Z2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71LQ8N9Z2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CCDC71LQ8N9Z2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71LQ8N9Z2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 AC020928.2-201ENST00000588717 2197 ntBASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71LQ8N9Z2 AC135983.2-203ENST00000454486 1613 ntBASIC20.64■□□□□ 0.9
CCDC71LQ8N9Z2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC71LQ8N9Z2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC71LQ8N9Z2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71LQ8N9Z2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC71LQ8N9Z2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71LQ8N9Z2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71LQ8N9Z2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC71LQ8N9Z2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71LQ8N9Z2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC71LQ8N9Z2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71LQ8N9Z2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71LQ8N9Z2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC71LQ8N9Z2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms