Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD1Q8N668 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD1Q8N668 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD1Q8N668 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD1Q8N668 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD1Q8N668 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD1Q8N668 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.6■□□□□ 0.89
COMMD1Q8N668 MIR6090-201ENST00000622481 60 ntBASIC20.6■□□□□ 0.89
COMMD1Q8N668 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD1Q8N668 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
COMMD1Q8N668 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.59■□□□□ 0.89
COMMD1Q8N668 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD1Q8N668 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD1Q8N668 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COMMD1Q8N668 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD1Q8N668 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.58■□□□□ 0.89
COMMD1Q8N668 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.58■□□□□ 0.88
COMMD1Q8N668 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
COMMD1Q8N668 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD1Q8N668 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD1Q8N668 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD1Q8N668 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD1Q8N668 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD1Q8N668 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
COMMD1Q8N668 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.57■□□□□ 0.88
COMMD1Q8N668 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
COMMD1Q8N668 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.57■□□□□ 0.88
COMMD1Q8N668 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD1Q8N668 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.57■□□□□ 0.88
COMMD1Q8N668 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.56■□□□□ 0.88
COMMD1Q8N668 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD1Q8N668 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.56■□□□□ 0.88
COMMD1Q8N668 MIR7108-201ENST00000614319 87 ntBASIC20.56■□□□□ 0.88
COMMD1Q8N668 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.56■□□□□ 0.88
COMMD1Q8N668 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD1Q8N668 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 ZNRF2P2-203ENST00000454624 420 ntBASIC20.55■□□□□ 0.88
COMMD1Q8N668 AC021231.2-201ENST00000594613 730 ntBASIC20.55■□□□□ 0.88
COMMD1Q8N668 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD1Q8N668 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD1Q8N668 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD1Q8N668 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD1Q8N668 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD1Q8N668 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD1Q8N668 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COMMD1Q8N668 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD1Q8N668 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD1Q8N668 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.53■□□□□ 0.88
COMMD1Q8N668 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD1Q8N668 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.53■□□□□ 0.88
COMMD1Q8N668 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.53■□□□□ 0.88
COMMD1Q8N668 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.53■□□□□ 0.88
COMMD1Q8N668 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD1Q8N668 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD1Q8N668 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD1Q8N668 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.52■□□□□ 0.88
COMMD1Q8N668 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.52■□□□□ 0.88
COMMD1Q8N668 AC093323.1-202ENST00000635031 2045 ntBASIC20.52■□□□□ 0.88
COMMD1Q8N668 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD1Q8N668 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD1Q8N668 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD1Q8N668 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD1Q8N668 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD1Q8N668 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD1Q8N668 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
COMMD1Q8N668 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COMMD1Q8N668 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD1Q8N668 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.5■□□□□ 0.87
COMMD1Q8N668 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD1Q8N668 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.49■□□□□ 0.87
COMMD1Q8N668 AC091060.1-201ENST00000623524 1766 ntBASIC20.49■□□□□ 0.87
COMMD1Q8N668 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COMMD1Q8N668 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.48■□□□□ 0.87
COMMD1Q8N668 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COMMD1Q8N668 AC020928.2-201ENST00000588717 2197 ntBASIC20.48■□□□□ 0.87
COMMD1Q8N668 AC010864.1-201ENST00000609407 1511 ntBASIC20.48■□□□□ 0.87
COMMD1Q8N668 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD1Q8N668 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms