Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC133552.2-201ENST00000619106 1032 ntBASIC26.17■■□□□ 1.78
SLC44A3Q8N4M1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SLC44A3Q8N4M1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SLC44A3Q8N4M1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.16■■□□□ 1.78
SLC44A3Q8N4M1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLC44A3Q8N4M1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLC44A3Q8N4M1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLC44A3Q8N4M1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.15■■□□□ 1.78
SLC44A3Q8N4M1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.15■■□□□ 1.78
SLC44A3Q8N4M1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.15■■□□□ 1.78
SLC44A3Q8N4M1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.15■■□□□ 1.78
SLC44A3Q8N4M1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SLC44A3Q8N4M1 AC009831.1-201ENST00000580420 1582 ntBASIC26.15■■□□□ 1.78
SLC44A3Q8N4M1 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.14■■□□□ 1.78
SLC44A3Q8N4M1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SLC44A3Q8N4M1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLC44A3Q8N4M1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A3Q8N4M1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A3Q8N4M1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A3Q8N4M1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A3Q8N4M1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.12■■□□□ 1.77
SLC44A3Q8N4M1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.12■■□□□ 1.77
SLC44A3Q8N4M1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC44A3Q8N4M1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLC44A3Q8N4M1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A3Q8N4M1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.1■■□□□ 1.77
SLC44A3Q8N4M1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A3Q8N4M1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLC44A3Q8N4M1 AL035685.1-201ENST00000636663 812 ntBASIC26.1■■□□□ 1.77
SLC44A3Q8N4M1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.09■■□□□ 1.77
SLC44A3Q8N4M1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A3Q8N4M1 SMPD5-203ENST00000639008 1464 ntBASIC26.09■■□□□ 1.77
SLC44A3Q8N4M1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC44A3Q8N4M1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC44A3Q8N4M1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC44A3Q8N4M1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.08■■□□□ 1.77
SLC44A3Q8N4M1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC44A3Q8N4M1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A3Q8N4M1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A3Q8N4M1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A3Q8N4M1 AL451085.2-201ENST00000605085 799 ntBASIC26.06■■□□□ 1.76
SLC44A3Q8N4M1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
SLC44A3Q8N4M1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC44A3Q8N4M1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.05■■□□□ 1.76
SLC44A3Q8N4M1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC44A3Q8N4M1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLC44A3Q8N4M1 AC026202.3-201ENST00000600805 1127 ntBASIC26.04■■□□□ 1.76
SLC44A3Q8N4M1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
SLC44A3Q8N4M1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A3Q8N4M1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A3Q8N4M1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A3Q8N4M1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC44A3Q8N4M1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC44A3Q8N4M1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC44A3Q8N4M1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC44A3Q8N4M1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SLC44A3Q8N4M1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
SLC44A3Q8N4M1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLC44A3Q8N4M1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26■■□□□ 1.75
SLC44A3Q8N4M1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26■■□□□ 1.75
SLC44A3Q8N4M1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.99■■□□□ 1.75
SLC44A3Q8N4M1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.99■■□□□ 1.75
SLC44A3Q8N4M1 AL359258.2-201ENST00000564063 1566 ntBASIC25.99■■□□□ 1.75
SLC44A3Q8N4M1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
SLC44A3Q8N4M1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLC44A3Q8N4M1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC44A3Q8N4M1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC44A3Q8N4M1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SLC44A3Q8N4M1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SLC44A3Q8N4M1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC44A3Q8N4M1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
SLC44A3Q8N4M1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 DUX4L9-201ENST00000449051 1259 ntBASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 BHLHE23-202ENST00000612929 1109 ntBASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.95■■□□□ 1.74
SLC44A3Q8N4M1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SLC44A3Q8N4M1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
SLC44A3Q8N4M1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SLC44A3Q8N4M1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.94■■□□□ 1.74
SLC44A3Q8N4M1 AC025884.2-201ENST00000553429 711 ntBASIC25.94■■□□□ 1.74
SLC44A3Q8N4M1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SLC44A3Q8N4M1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SLC44A3Q8N4M1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.93■■□□□ 1.74
SLC44A3Q8N4M1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.93■■□□□ 1.74
SLC44A3Q8N4M1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.93■■□□□ 1.74
SLC44A3Q8N4M1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SLC44A3Q8N4M1 AL592295.1-201ENST00000400984 884 ntBASIC25.92■■□□□ 1.74
SLC44A3Q8N4M1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.92■■□□□ 1.74
SLC44A3Q8N4M1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
SLC44A3Q8N4M1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms