Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHPFQ8IZ52 AC126177.7-201ENST00000547904 679 ntBASIC25.71■■□□□ 1.71
CHPFQ8IZ52 AC100797.4-201ENST00000631653 1827 ntBASIC25.71■■□□□ 1.71
CHPFQ8IZ52 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CHPFQ8IZ52 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CHPFQ8IZ52 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CHPFQ8IZ52 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.7■■□□□ 1.7
CHPFQ8IZ52 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHPFQ8IZ52 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHPFQ8IZ52 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.68■■□□□ 1.7
CHPFQ8IZ52 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.68■■□□□ 1.7
CHPFQ8IZ52 AC012354.3-201ENST00000623734 483 ntBASIC25.68■■□□□ 1.7
CHPFQ8IZ52 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHPFQ8IZ52 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHPFQ8IZ52 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHPFQ8IZ52 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.67■■□□□ 1.7
CHPFQ8IZ52 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHPFQ8IZ52 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.66■■□□□ 1.7
CHPFQ8IZ52 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.66■■□□□ 1.7
CHPFQ8IZ52 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.66■■□□□ 1.7
CHPFQ8IZ52 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.66■■□□□ 1.7
CHPFQ8IZ52 AC092296.2-201ENST00000589470 999 ntBASIC25.66■■□□□ 1.7
CHPFQ8IZ52 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.65■■□□□ 1.7
CHPFQ8IZ52 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHPFQ8IZ52 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.65■■□□□ 1.7
CHPFQ8IZ52 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHPFQ8IZ52 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.62■■□□□ 1.69
CHPFQ8IZ52 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.62■■□□□ 1.69
CHPFQ8IZ52 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHPFQ8IZ52 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.62■■□□□ 1.69
CHPFQ8IZ52 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHPFQ8IZ52 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHPFQ8IZ52 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHPFQ8IZ52 ECEL1P2-201ENST00000461596 1295 ntBASIC25.61■■□□□ 1.69
CHPFQ8IZ52 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHPFQ8IZ52 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHPFQ8IZ52 U85056.1-201ENST00000616429 682 ntBASIC25.61■■□□□ 1.69
CHPFQ8IZ52 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.61■■□□□ 1.69
CHPFQ8IZ52 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHPFQ8IZ52 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.6■■□□□ 1.69
CHPFQ8IZ52 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHPFQ8IZ52 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHPFQ8IZ52 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHPFQ8IZ52 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.6■■□□□ 1.69
CHPFQ8IZ52 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CHPFQ8IZ52 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHPFQ8IZ52 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHPFQ8IZ52 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
CHPFQ8IZ52 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHPFQ8IZ52 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.58■■□□□ 1.69
CHPFQ8IZ52 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHPFQ8IZ52 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHPFQ8IZ52 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHPFQ8IZ52 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHPFQ8IZ52 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHPFQ8IZ52 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CHPFQ8IZ52 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CHPFQ8IZ52 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.57■■□□□ 1.68
CHPFQ8IZ52 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.56■■□□□ 1.68
CHPFQ8IZ52 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CHPFQ8IZ52 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CHPFQ8IZ52 AL139393.2-201ENST00000608721 2025 ntBASIC25.56■■□□□ 1.68
CHPFQ8IZ52 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CHPFQ8IZ52 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHPFQ8IZ52 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.55■■□□□ 1.68
CHPFQ8IZ52 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CHPFQ8IZ52 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHPFQ8IZ52 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHPFQ8IZ52 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.54■■□□□ 1.68
CHPFQ8IZ52 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CHPFQ8IZ52 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHPFQ8IZ52 AC018358.1-201ENST00000631079 1402 ntBASIC25.54■■□□□ 1.68
CHPFQ8IZ52 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CHPFQ8IZ52 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.53■■□□□ 1.68
CHPFQ8IZ52 ABCB10P3-201ENST00000561950 2166 ntBASIC25.52■■□□□ 1.68
CHPFQ8IZ52 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.52■■□□□ 1.68
CHPFQ8IZ52 AL157400.5-201ENST00000507624 621 ntBASIC25.52■■□□□ 1.68
CHPFQ8IZ52 AL033527.3-201ENST00000566366 1196 ntBASIC25.52■■□□□ 1.68
CHPFQ8IZ52 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHPFQ8IZ52 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CHPFQ8IZ52 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHPFQ8IZ52 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CHPFQ8IZ52 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHPFQ8IZ52 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHPFQ8IZ52 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHPFQ8IZ52 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CHPFQ8IZ52 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHPFQ8IZ52 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHPFQ8IZ52 AL359258.2-201ENST00000564063 1566 ntBASIC25.48■■□□□ 1.67
CHPFQ8IZ52 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.48■■□□□ 1.67
CHPFQ8IZ52 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CHPFQ8IZ52 KRT18P60-201ENST00000312876 1297 ntBASIC25.47■■□□□ 1.67
CHPFQ8IZ52 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms