Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SFTPA1Q8IWL2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.79■■□□□ 1.72
SFTPA1Q8IWL2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SFTPA1Q8IWL2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.78■■□□□ 1.72
SFTPA1Q8IWL2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.78■■□□□ 1.72
SFTPA1Q8IWL2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.78■■□□□ 1.72
SFTPA1Q8IWL2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.78■■□□□ 1.72
SFTPA1Q8IWL2 AC018358.1-201ENST00000631079 1402 ntBASIC25.78■■□□□ 1.72
SFTPA1Q8IWL2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SFTPA1Q8IWL2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SFTPA1Q8IWL2 AL033527.3-201ENST00000566366 1196 ntBASIC25.77■■□□□ 1.72
SFTPA1Q8IWL2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SFTPA1Q8IWL2 AL157400.5-201ENST00000507624 621 ntBASIC25.76■■□□□ 1.71
SFTPA1Q8IWL2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SFTPA1Q8IWL2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.76■■□□□ 1.71
SFTPA1Q8IWL2 AL139393.2-201ENST00000608721 2025 ntBASIC25.76■■□□□ 1.71
SFTPA1Q8IWL2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SFTPA1Q8IWL2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SFTPA1Q8IWL2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SFTPA1Q8IWL2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SFTPA1Q8IWL2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
SFTPA1Q8IWL2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SFTPA1Q8IWL2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.73■■□□□ 1.71
SFTPA1Q8IWL2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SFTPA1Q8IWL2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SFTPA1Q8IWL2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SFTPA1Q8IWL2 ABCB10P3-201ENST00000561950 2166 ntBASIC25.72■■□□□ 1.71
SFTPA1Q8IWL2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SFTPA1Q8IWL2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SFTPA1Q8IWL2 KRT18P60-201ENST00000312876 1297 ntBASIC25.72■■□□□ 1.71
SFTPA1Q8IWL2 ABCB10P1-201ENST00000614297 2181 ntBASIC25.72■■□□□ 1.71
SFTPA1Q8IWL2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SFTPA1Q8IWL2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SFTPA1Q8IWL2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SFTPA1Q8IWL2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.71■■□□□ 1.71
SFTPA1Q8IWL2 ECEL1P2-201ENST00000461596 1295 ntBASIC25.71■■□□□ 1.71
SFTPA1Q8IWL2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.71■■□□□ 1.71
SFTPA1Q8IWL2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SFTPA1Q8IWL2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.7■■□□□ 1.71
SFTPA1Q8IWL2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
SFTPA1Q8IWL2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SFTPA1Q8IWL2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SFTPA1Q8IWL2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.69■■□□□ 1.7
SFTPA1Q8IWL2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.69■■□□□ 1.7
SFTPA1Q8IWL2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SFTPA1Q8IWL2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.69■■□□□ 1.7
SFTPA1Q8IWL2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SFTPA1Q8IWL2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SFTPA1Q8IWL2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SFTPA1Q8IWL2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
SFTPA1Q8IWL2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SFTPA1Q8IWL2 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.66■■□□□ 1.7
SFTPA1Q8IWL2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.66■■□□□ 1.7
SFTPA1Q8IWL2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SFTPA1Q8IWL2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SFTPA1Q8IWL2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SFTPA1Q8IWL2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SFTPA1Q8IWL2 AC126177.7-201ENST00000547904 679 ntBASIC25.64■■□□□ 1.7
SFTPA1Q8IWL2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SFTPA1Q8IWL2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
SFTPA1Q8IWL2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
SFTPA1Q8IWL2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.64■■□□□ 1.69
SFTPA1Q8IWL2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SFTPA1Q8IWL2 AC004987.1-201ENST00000428627 508 ntBASIC25.63■■□□□ 1.69
SFTPA1Q8IWL2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.63■■□□□ 1.69
SFTPA1Q8IWL2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SFTPA1Q8IWL2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SFTPA1Q8IWL2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
SFTPA1Q8IWL2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SFTPA1Q8IWL2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SFTPA1Q8IWL2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SFTPA1Q8IWL2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.61■■□□□ 1.69
SFTPA1Q8IWL2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.61■■□□□ 1.69
SFTPA1Q8IWL2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.61■■□□□ 1.69
SFTPA1Q8IWL2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SFTPA1Q8IWL2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SFTPA1Q8IWL2 AL359258.2-201ENST00000564063 1566 ntBASIC25.61■■□□□ 1.69
SFTPA1Q8IWL2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SFTPA1Q8IWL2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
SFTPA1Q8IWL2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SFTPA1Q8IWL2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.6■■□□□ 1.69
SFTPA1Q8IWL2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SFTPA1Q8IWL2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SFTPA1Q8IWL2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SFTPA1Q8IWL2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SFTPA1Q8IWL2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SFTPA1Q8IWL2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SFTPA1Q8IWL2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SFTPA1Q8IWL2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SFTPA1Q8IWL2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SFTPA1Q8IWL2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SFTPA1Q8IWL2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SFTPA1Q8IWL2 ATP5G2P3-201ENST00000429083 425 ntBASIC25.58■■□□□ 1.69
SFTPA1Q8IWL2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.58■■□□□ 1.69
SFTPA1Q8IWL2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.58■■□□□ 1.69
SFTPA1Q8IWL2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SFTPA1Q8IWL2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SFTPA1Q8IWL2 TSPY13P-201ENST00000338964 914 ntBASIC25.57■■□□□ 1.68
SFTPA1Q8IWL2 AC007029.1-201ENST00000604183 313 ntBASIC25.57■■□□□ 1.68
SFTPA1Q8IWL2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms