Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAB43Q86YS6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB43Q86YS6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB43Q86YS6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RAB43Q86YS6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB43Q86YS6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB43Q86YS6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAB43Q86YS6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RAB43Q86YS6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RAB43Q86YS6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAB43Q86YS6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB43Q86YS6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.81■■□□□ 1.4
RAB43Q86YS6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB43Q86YS6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB43Q86YS6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB43Q86YS6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.8■■□□□ 1.4
RAB43Q86YS6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RAB43Q86YS6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAB43Q86YS6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RAB43Q86YS6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB43Q86YS6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.79■■□□□ 1.4
RAB43Q86YS6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB43Q86YS6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RAB43Q86YS6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
RAB43Q86YS6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAB43Q86YS6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
RAB43Q86YS6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB43Q86YS6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RAB43Q86YS6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
RAB43Q86YS6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.77■■□□□ 1.4
RAB43Q86YS6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.77■■□□□ 1.4
RAB43Q86YS6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RAB43Q86YS6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RAB43Q86YS6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB43Q86YS6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.76■■□□□ 1.39
RAB43Q86YS6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB43Q86YS6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.75■■□□□ 1.39
RAB43Q86YS6 MIR219A2-201ENST00000608502 1504 ntBASIC23.75■■□□□ 1.39
RAB43Q86YS6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB43Q86YS6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB43Q86YS6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RAB43Q86YS6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RAB43Q86YS6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RAB43Q86YS6 AP004833.2-201ENST00000532228 1454 ntBASIC23.74■■□□□ 1.39
RAB43Q86YS6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.74■■□□□ 1.39
RAB43Q86YS6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB43Q86YS6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB43Q86YS6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB43Q86YS6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB43Q86YS6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB43Q86YS6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB43Q86YS6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB43Q86YS6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB43Q86YS6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB43Q86YS6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.73■■□□□ 1.39
RAB43Q86YS6 ST7-AS1-201ENST00000456775 1889 ntBASIC23.73■■□□□ 1.39
RAB43Q86YS6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.72■■□□□ 1.39
RAB43Q86YS6 AC135731.1-201ENST00000569415 2548 ntBASIC23.72■■□□□ 1.39
RAB43Q86YS6 AC060814.1-201ENST00000554326 538 ntBASIC23.72■■□□□ 1.39
RAB43Q86YS6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.72■■□□□ 1.39
RAB43Q86YS6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB43Q86YS6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.72■■□□□ 1.39
RAB43Q86YS6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.72■■□□□ 1.39
RAB43Q86YS6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB43Q86YS6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.71■■□□□ 1.39
RAB43Q86YS6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB43Q86YS6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB43Q86YS6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB43Q86YS6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAB43Q86YS6 AC126177.7-201ENST00000547904 679 ntBASIC23.71■■□□□ 1.39
RAB43Q86YS6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB43Q86YS6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB43Q86YS6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB43Q86YS6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAB43Q86YS6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAB43Q86YS6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RAB43Q86YS6 NTF6A-201ENST00000591175 560 ntBASIC23.68■■□□□ 1.38
RAB43Q86YS6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAB43Q86YS6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.67■■□□□ 1.38
RAB43Q86YS6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
RAB43Q86YS6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAB43Q86YS6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RAB43Q86YS6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB43Q86YS6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB43Q86YS6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB43Q86YS6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB43Q86YS6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB43Q86YS6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB43Q86YS6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RAB43Q86YS6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RAB43Q86YS6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RAB43Q86YS6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAB43Q86YS6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAB43Q86YS6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.64■■□□□ 1.37
RAB43Q86YS6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.64■■□□□ 1.37
RAB43Q86YS6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAB43Q86YS6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAB43Q86YS6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAB43Q86YS6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.63■■□□□ 1.37
RAB43Q86YS6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms