Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
NFE4Q86UQ8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFE4Q86UQ8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFE4Q86UQ8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFE4Q86UQ8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFE4Q86UQ8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.8■□□□□ 0.44
NFE4Q86UQ8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NFE4Q86UQ8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NFE4Q86UQ8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 MIR7108-201ENST00000614319 87 ntBASIC17.78■□□□□ 0.44
NFE4Q86UQ8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NFE4Q86UQ8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NFE4Q86UQ8 LINC01003-201ENST00000564834 1764 ntBASIC17.77■□□□□ 0.44
NFE4Q86UQ8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.77■□□□□ 0.44
NFE4Q86UQ8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.77■□□□□ 0.44
NFE4Q86UQ8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NFE4Q86UQ8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NFE4Q86UQ8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.76■□□□□ 0.43
NFE4Q86UQ8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NFE4Q86UQ8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NFE4Q86UQ8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NFE4Q86UQ8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 AP004833.2-201ENST00000532228 1454 ntBASIC17.75■□□□□ 0.43
NFE4Q86UQ8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NFE4Q86UQ8 AC010864.1-201ENST00000609407 1511 ntBASIC17.74■□□□□ 0.43
NFE4Q86UQ8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFE4Q86UQ8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NFE4Q86UQ8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NFE4Q86UQ8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.74■□□□□ 0.43
NFE4Q86UQ8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NFE4Q86UQ8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFE4Q86UQ8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NFE4Q86UQ8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFE4Q86UQ8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.73■□□□□ 0.43
NFE4Q86UQ8 ZNRF2P2-203ENST00000454624 420 ntBASIC17.73■□□□□ 0.43
NFE4Q86UQ8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NFE4Q86UQ8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NFE4Q86UQ8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFE4Q86UQ8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFE4Q86UQ8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.72■□□□□ 0.43
NFE4Q86UQ8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.72■□□□□ 0.43
NFE4Q86UQ8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NFE4Q86UQ8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NFE4Q86UQ8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFE4Q86UQ8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.71■□□□□ 0.43
NFE4Q86UQ8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFE4Q86UQ8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NFE4Q86UQ8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFE4Q86UQ8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.7■□□□□ 0.42
NFE4Q86UQ8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFE4Q86UQ8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.7■□□□□ 0.42
NFE4Q86UQ8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NFE4Q86UQ8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NFE4Q86UQ8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.69■□□□□ 0.42
NFE4Q86UQ8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NFE4Q86UQ8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.68■□□□□ 0.42
NFE4Q86UQ8 MIR6090-201ENST00000622481 60 ntBASIC17.68■□□□□ 0.42
NFE4Q86UQ8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NFE4Q86UQ8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NFE4Q86UQ8 AC091060.1-201ENST00000623524 1766 ntBASIC17.67■□□□□ 0.42
NFE4Q86UQ8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NFE4Q86UQ8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NFE4Q86UQ8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NFE4Q86UQ8 AC021231.2-201ENST00000594613 730 ntBASIC17.67■□□□□ 0.42
NFE4Q86UQ8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.66■□□□□ 0.42
NFE4Q86UQ8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms