Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
SH3RF1Q7Z6J0 AC022413.1-201ENST00000624602 984 ntBASIC28.99■■■□□ 2.23
SH3RF1Q7Z6J0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SH3RF1Q7Z6J0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
SH3RF1Q7Z6J0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.98■■■□□ 2.23
SH3RF1Q7Z6J0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.98■■■□□ 2.23
SH3RF1Q7Z6J0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SH3RF1Q7Z6J0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SH3RF1Q7Z6J0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.97■■■□□ 2.23
SH3RF1Q7Z6J0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SH3RF1Q7Z6J0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.97■■■□□ 2.23
SH3RF1Q7Z6J0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SH3RF1Q7Z6J0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SH3RF1Q7Z6J0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
SH3RF1Q7Z6J0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SH3RF1Q7Z6J0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SH3RF1Q7Z6J0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
SH3RF1Q7Z6J0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
SH3RF1Q7Z6J0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SH3RF1Q7Z6J0 LINC00273-201ENST00000539813 1452 ntBASIC28.92■■■□□ 2.22
SH3RF1Q7Z6J0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SH3RF1Q7Z6J0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.92■■■□□ 2.22
SH3RF1Q7Z6J0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
SH3RF1Q7Z6J0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
SH3RF1Q7Z6J0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SH3RF1Q7Z6J0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SH3RF1Q7Z6J0 AL033527.3-201ENST00000566366 1196 ntBASIC28.9■■■□□ 2.22
SH3RF1Q7Z6J0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
SH3RF1Q7Z6J0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SH3RF1Q7Z6J0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
SH3RF1Q7Z6J0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
SH3RF1Q7Z6J0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.89■■■□□ 2.22
SH3RF1Q7Z6J0 AC008813.1-201ENST00000536597 885 ntBASIC28.89■■■□□ 2.22
SH3RF1Q7Z6J0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
SH3RF1Q7Z6J0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SH3RF1Q7Z6J0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.87■■■□□ 2.21
SH3RF1Q7Z6J0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SH3RF1Q7Z6J0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
SH3RF1Q7Z6J0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.87■■■□□ 2.21
SH3RF1Q7Z6J0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SH3RF1Q7Z6J0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.86■■■□□ 2.21
SH3RF1Q7Z6J0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
SH3RF1Q7Z6J0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SH3RF1Q7Z6J0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SH3RF1Q7Z6J0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
SH3RF1Q7Z6J0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SH3RF1Q7Z6J0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.85■■■□□ 2.21
SH3RF1Q7Z6J0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SH3RF1Q7Z6J0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.85■■■□□ 2.21
SH3RF1Q7Z6J0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.85■■■□□ 2.21
SH3RF1Q7Z6J0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SH3RF1Q7Z6J0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SH3RF1Q7Z6J0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SH3RF1Q7Z6J0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SH3RF1Q7Z6J0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SH3RF1Q7Z6J0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SH3RF1Q7Z6J0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
SH3RF1Q7Z6J0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
SH3RF1Q7Z6J0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SH3RF1Q7Z6J0 AC018358.1-201ENST00000631079 1402 ntBASIC28.82■■■□□ 2.2
SH3RF1Q7Z6J0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.82■■■□□ 2.2
SH3RF1Q7Z6J0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
SH3RF1Q7Z6J0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SH3RF1Q7Z6J0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.81■■■□□ 2.2
SH3RF1Q7Z6J0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.81■■■□□ 2.2
SH3RF1Q7Z6J0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SH3RF1Q7Z6J0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SH3RF1Q7Z6J0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SH3RF1Q7Z6J0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SH3RF1Q7Z6J0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.8■■■□□ 2.2
SH3RF1Q7Z6J0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.8■■■□□ 2.2
SH3RF1Q7Z6J0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.8■■■□□ 2.2
SH3RF1Q7Z6J0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SH3RF1Q7Z6J0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SH3RF1Q7Z6J0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SH3RF1Q7Z6J0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.79■■■□□ 2.2
SH3RF1Q7Z6J0 U85056.1-201ENST00000616429 682 ntBASIC28.79■■■□□ 2.2
SH3RF1Q7Z6J0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
SH3RF1Q7Z6J0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SH3RF1Q7Z6J0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SH3RF1Q7Z6J0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SH3RF1Q7Z6J0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
SH3RF1Q7Z6J0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
SH3RF1Q7Z6J0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.77■■■□□ 2.2
SH3RF1Q7Z6J0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SH3RF1Q7Z6J0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SH3RF1Q7Z6J0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SH3RF1Q7Z6J0 AC100797.4-201ENST00000631653 1827 ntBASIC28.76■■■□□ 2.19
SH3RF1Q7Z6J0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SH3RF1Q7Z6J0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SH3RF1Q7Z6J0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
SH3RF1Q7Z6J0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SH3RF1Q7Z6J0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms