Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
COPS6Q7L5N1 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.2■■■□□ 2.75
COPS6Q7L5N1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
COPS6Q7L5N1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
COPS6Q7L5N1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.18■■■□□ 2.74
COPS6Q7L5N1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
COPS6Q7L5N1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.17■■■□□ 2.74
COPS6Q7L5N1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
COPS6Q7L5N1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.17■■■□□ 2.74
COPS6Q7L5N1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
COPS6Q7L5N1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
COPS6Q7L5N1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
COPS6Q7L5N1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.15■■■□□ 2.74
COPS6Q7L5N1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.15■■■□□ 2.74
COPS6Q7L5N1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COPS6Q7L5N1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
COPS6Q7L5N1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
COPS6Q7L5N1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.14■■■□□ 2.74
COPS6Q7L5N1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
COPS6Q7L5N1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
COPS6Q7L5N1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
COPS6Q7L5N1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
COPS6Q7L5N1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COPS6Q7L5N1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
COPS6Q7L5N1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
COPS6Q7L5N1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.11■■■□□ 2.73
COPS6Q7L5N1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.11■■■□□ 2.73
COPS6Q7L5N1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
COPS6Q7L5N1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.11■■■□□ 2.73
COPS6Q7L5N1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
COPS6Q7L5N1 AC092296.2-201ENST00000589470 999 ntBASIC32.11■■■□□ 2.73
COPS6Q7L5N1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
COPS6Q7L5N1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
COPS6Q7L5N1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
COPS6Q7L5N1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
COPS6Q7L5N1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
COPS6Q7L5N1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.07■■■□□ 2.72
COPS6Q7L5N1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
COPS6Q7L5N1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
COPS6Q7L5N1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
COPS6Q7L5N1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
COPS6Q7L5N1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
COPS6Q7L5N1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.04■■■□□ 2.72
COPS6Q7L5N1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
COPS6Q7L5N1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.04■■■□□ 2.72
COPS6Q7L5N1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
COPS6Q7L5N1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
COPS6Q7L5N1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.04■■■□□ 2.72
COPS6Q7L5N1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.04■■■□□ 2.72
COPS6Q7L5N1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
COPS6Q7L5N1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
COPS6Q7L5N1 AP002414.2-202ENST00000590929 1450 ntBASIC32.03■■■□□ 2.72
COPS6Q7L5N1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
COPS6Q7L5N1 AC126177.7-201ENST00000547904 679 ntBASIC32.02■■■□□ 2.72
COPS6Q7L5N1 NTF6A-201ENST00000591175 560 ntBASIC32.02■■■□□ 2.72
COPS6Q7L5N1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
COPS6Q7L5N1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
COPS6Q7L5N1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.01■■■□□ 2.71
COPS6Q7L5N1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.01■■■□□ 2.71
COPS6Q7L5N1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.01■■■□□ 2.71
COPS6Q7L5N1 ECEL1P2-201ENST00000461596 1295 ntBASIC32■■■□□ 2.71
COPS6Q7L5N1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32■■■□□ 2.71
COPS6Q7L5N1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
COPS6Q7L5N1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
COPS6Q7L5N1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.99■■■□□ 2.71
COPS6Q7L5N1 AL157400.5-201ENST00000507624 621 ntBASIC31.99■■■□□ 2.71
COPS6Q7L5N1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
COPS6Q7L5N1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
COPS6Q7L5N1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
COPS6Q7L5N1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
COPS6Q7L5N1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COPS6Q7L5N1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COPS6Q7L5N1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.98■■■□□ 2.71
COPS6Q7L5N1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
COPS6Q7L5N1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COPS6Q7L5N1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
COPS6Q7L5N1 U85056.1-201ENST00000616429 682 ntBASIC31.96■■■□□ 2.71
COPS6Q7L5N1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
COPS6Q7L5N1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.96■■■□□ 2.71
COPS6Q7L5N1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
COPS6Q7L5N1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
COPS6Q7L5N1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
COPS6Q7L5N1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
COPS6Q7L5N1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.94■■■□□ 2.7
COPS6Q7L5N1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
COPS6Q7L5N1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
COPS6Q7L5N1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
COPS6Q7L5N1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
COPS6Q7L5N1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
COPS6Q7L5N1 AL359258.2-201ENST00000564063 1566 ntBASIC31.92■■■□□ 2.7
COPS6Q7L5N1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.92■■■□□ 2.7
COPS6Q7L5N1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
COPS6Q7L5N1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
COPS6Q7L5N1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.91■■■□□ 2.7
COPS6Q7L5N1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
COPS6Q7L5N1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.91■■■□□ 2.7
COPS6Q7L5N1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COPS6Q7L5N1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
COPS6Q7L5N1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.9■■■□□ 2.7
COPS6Q7L5N1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms