Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDHR3Q6ZTQ4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDHR3Q6ZTQ4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDHR3Q6ZTQ4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDHR3Q6ZTQ4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.26■■□□□ 1.63
CDHR3Q6ZTQ4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.26■■□□□ 1.63
CDHR3Q6ZTQ4 AC135731.1-201ENST00000569415 2548 ntBASIC25.26■■□□□ 1.63
CDHR3Q6ZTQ4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 AC021231.2-201ENST00000594613 730 ntBASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDHR3Q6ZTQ4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDHR3Q6ZTQ4 AP002414.2-202ENST00000590929 1450 ntBASIC25.24■■□□□ 1.63
CDHR3Q6ZTQ4 ZNRF2P2-203ENST00000454624 420 ntBASIC25.23■■□□□ 1.63
CDHR3Q6ZTQ4 MIR7108-201ENST00000614319 87 ntBASIC25.23■■□□□ 1.63
CDHR3Q6ZTQ4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CDHR3Q6ZTQ4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CDHR3Q6ZTQ4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.22■■□□□ 1.63
CDHR3Q6ZTQ4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDHR3Q6ZTQ4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDHR3Q6ZTQ4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.21■■□□□ 1.63
CDHR3Q6ZTQ4 AL449106.1-201ENST00000608517 1980 ntBASIC25.2■■□□□ 1.63
CDHR3Q6ZTQ4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CDHR3Q6ZTQ4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDHR3Q6ZTQ4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDHR3Q6ZTQ4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDHR3Q6ZTQ4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDHR3Q6ZTQ4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.19■■□□□ 1.62
CDHR3Q6ZTQ4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDHR3Q6ZTQ4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CDHR3Q6ZTQ4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDHR3Q6ZTQ4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDHR3Q6ZTQ4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CDHR3Q6ZTQ4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.18■■□□□ 1.62
CDHR3Q6ZTQ4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDHR3Q6ZTQ4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.17■■□□□ 1.62
CDHR3Q6ZTQ4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CDHR3Q6ZTQ4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.16■■□□□ 1.62
CDHR3Q6ZTQ4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDHR3Q6ZTQ4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDHR3Q6ZTQ4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDHR3Q6ZTQ4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.15■■□□□ 1.62
CDHR3Q6ZTQ4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.15■■□□□ 1.62
CDHR3Q6ZTQ4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDHR3Q6ZTQ4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.15■■□□□ 1.62
CDHR3Q6ZTQ4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.15■■□□□ 1.62
CDHR3Q6ZTQ4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDHR3Q6ZTQ4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDHR3Q6ZTQ4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDHR3Q6ZTQ4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDHR3Q6ZTQ4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDHR3Q6ZTQ4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.13■■□□□ 1.61
CDHR3Q6ZTQ4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CDHR3Q6ZTQ4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDHR3Q6ZTQ4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDHR3Q6ZTQ4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDHR3Q6ZTQ4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CDHR3Q6ZTQ4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CDHR3Q6ZTQ4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDHR3Q6ZTQ4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.12■■□□□ 1.61
CDHR3Q6ZTQ4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.11■■□□□ 1.61
CDHR3Q6ZTQ4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDHR3Q6ZTQ4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDHR3Q6ZTQ4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CDHR3Q6ZTQ4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CDHR3Q6ZTQ4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CDHR3Q6ZTQ4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDHR3Q6ZTQ4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.1■■□□□ 1.61
CDHR3Q6ZTQ4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CDHR3Q6ZTQ4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDHR3Q6ZTQ4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDHR3Q6ZTQ4 AC135983.2-203ENST00000454486 1613 ntBASIC25.09■■□□□ 1.61
CDHR3Q6ZTQ4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.09■■□□□ 1.61
CDHR3Q6ZTQ4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
CDHR3Q6ZTQ4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDHR3Q6ZTQ4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDHR3Q6ZTQ4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDHR3Q6ZTQ4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CDHR3Q6ZTQ4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.08■■□□□ 1.6
CDHR3Q6ZTQ4 AC091060.1-201ENST00000623524 1766 ntBASIC25.08■■□□□ 1.6
CDHR3Q6ZTQ4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDHR3Q6ZTQ4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDHR3Q6ZTQ4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
CDHR3Q6ZTQ4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDHR3Q6ZTQ4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDHR3Q6ZTQ4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.06■■□□□ 1.6
CDHR3Q6ZTQ4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDHR3Q6ZTQ4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CDHR3Q6ZTQ4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CDHR3Q6ZTQ4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.05■■□□□ 1.6
CDHR3Q6ZTQ4 AC018358.1-201ENST00000631079 1402 ntBASIC25.05■■□□□ 1.6
CDHR3Q6ZTQ4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDHR3Q6ZTQ4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDHR3Q6ZTQ4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
CDHR3Q6ZTQ4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CDHR3Q6ZTQ4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms