Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC144NLQ6NUI1 MIR639-201ENST00000384974 98 ntBASIC20.38■□□□□ 0.85
CCDC144NLQ6NUI1 HLA-V-202ENST00000446817 847 ntBASIC20.38■□□□□ 0.85
CCDC144NLQ6NUI1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC144NLQ6NUI1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC144NLQ6NUI1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCDC144NLQ6NUI1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC144NLQ6NUI1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC144NLQ6NUI1 AC142086.6-201ENST00000621154 1765 ntBASIC20.37■□□□□ 0.85
CCDC144NLQ6NUI1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC144NLQ6NUI1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC144NLQ6NUI1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC144NLQ6NUI1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC144NLQ6NUI1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CCDC144NLQ6NUI1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC144NLQ6NUI1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC144NLQ6NUI1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC144NLQ6NUI1 AC018358.1-201ENST00000631079 1402 ntBASIC20.36■□□□□ 0.85
CCDC144NLQ6NUI1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC144NLQ6NUI1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144NLQ6NUI1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC144NLQ6NUI1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144NLQ6NUI1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC144NLQ6NUI1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC144NLQ6NUI1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC144NLQ6NUI1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC144NLQ6NUI1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC144NLQ6NUI1 AC148477.6-201ENST00000623746 465 ntBASIC20.32■□□□□ 0.84
CCDC144NLQ6NUI1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC144NLQ6NUI1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC144NLQ6NUI1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144NLQ6NUI1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144NLQ6NUI1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC144NLQ6NUI1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC144NLQ6NUI1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144NLQ6NUI1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144NLQ6NUI1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC144NLQ6NUI1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144NLQ6NUI1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144NLQ6NUI1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144NLQ6NUI1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCDC144NLQ6NUI1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144NLQ6NUI1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC144NLQ6NUI1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC144NLQ6NUI1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC144NLQ6NUI1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC144NLQ6NUI1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC144NLQ6NUI1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC144NLQ6NUI1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC144NLQ6NUI1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC144NLQ6NUI1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC144NLQ6NUI1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC144NLQ6NUI1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC144NLQ6NUI1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC144NLQ6NUI1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC144NLQ6NUI1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC144NLQ6NUI1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC144NLQ6NUI1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC144NLQ6NUI1 BX255925.1-201ENST00000566954 1854 ntBASIC20.24■□□□□ 0.83
CCDC144NLQ6NUI1 LINC01003-201ENST00000564834 1764 ntBASIC20.24■□□□□ 0.83
CCDC144NLQ6NUI1 MIR219A2-201ENST00000608502 1504 ntBASIC20.24■□□□□ 0.83
CCDC144NLQ6NUI1 MIR4449-201ENST00000578365 66 ntBASIC20.24■□□□□ 0.83
CCDC144NLQ6NUI1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC144NLQ6NUI1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC144NLQ6NUI1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC144NLQ6NUI1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC144NLQ6NUI1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC144NLQ6NUI1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 AC126177.7-201ENST00000547904 679 ntBASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC144NLQ6NUI1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms