Protein–RNA interactions for Protein: Q5VXH5

PRAMEF7, PRAME family member 7, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF7Q5VXH5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF7Q5VXH5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF7Q5VXH5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF7Q5VXH5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF7Q5VXH5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 RPS2P35-201ENST00000443417 897 ntBASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PRAMEF7Q5VXH5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRAMEF7Q5VXH5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.24■■□□□ 1.31
PRAMEF7Q5VXH5 AC110285.7-201ENST00000624417 1536 ntBASIC23.23■■□□□ 1.31
PRAMEF7Q5VXH5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.22■■□□□ 1.31
PRAMEF7Q5VXH5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.22■■□□□ 1.31
PRAMEF7Q5VXH5 AC021231.2-201ENST00000594613 730 ntBASIC23.22■■□□□ 1.31
PRAMEF7Q5VXH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 DUX4L29-201ENST00000425409 679 ntBASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PRAMEF7Q5VXH5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.16■■□□□ 1.3
PRAMEF7Q5VXH5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PRAMEF7Q5VXH5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF7Q5VXH5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.15■■□□□ 1.3
PRAMEF7Q5VXH5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF7Q5VXH5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF7Q5VXH5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.14■■□□□ 1.29
PRAMEF7Q5VXH5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.14■■□□□ 1.29
PRAMEF7Q5VXH5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.13■■□□□ 1.29
PRAMEF7Q5VXH5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF7Q5VXH5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PRAMEF7Q5VXH5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF7Q5VXH5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF7Q5VXH5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.11■■□□□ 1.29
PRAMEF7Q5VXH5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF7Q5VXH5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF7Q5VXH5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.09■■□□□ 1.29
PRAMEF7Q5VXH5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PRAMEF7Q5VXH5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms