Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 ZNRF2P2-203ENST00000454624 420 ntBASIC24.31■■□□□ 1.48
PRAMEF9Q5VWM5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.31■■□□□ 1.48
PRAMEF9Q5VWM5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PRAMEF9Q5VWM5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PRAMEF9Q5VWM5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.3■■□□□ 1.48
PRAMEF9Q5VWM5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PRAMEF9Q5VWM5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.3■■□□□ 1.48
PRAMEF9Q5VWM5 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.3■■□□□ 1.48
PRAMEF9Q5VWM5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PRAMEF9Q5VWM5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PRAMEF9Q5VWM5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
PRAMEF9Q5VWM5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PRAMEF9Q5VWM5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PRAMEF9Q5VWM5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PRAMEF9Q5VWM5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PRAMEF9Q5VWM5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PRAMEF9Q5VWM5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PRAMEF9Q5VWM5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRAMEF9Q5VWM5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 ABHD17AP4-201ENST00000411545 909 ntBASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L11-201ENST00000611504 1267 ntBASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L12-201ENST00000614593 1267 ntBASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L14-201ENST00000621227 1267 ntBASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PRAMEF9Q5VWM5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L13-201ENST00000554103 1267 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L15-201ENST00000611059 1267 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L23-201ENST00000615195 1269 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L24-201ENST00000617576 1269 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L22-201ENST00000618238 1269 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L20-201ENST00000619712 1269 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L21-201ENST00000622058 1269 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L10-201ENST00000622460 1267 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 DUX4L25-201ENST00000624915 1269 ntBASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRAMEF9Q5VWM5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PRAMEF9Q5VWM5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PRAMEF9Q5VWM5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PRAMEF9Q5VWM5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.24■■□□□ 1.47
PRAMEF9Q5VWM5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PRAMEF9Q5VWM5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PRAMEF9Q5VWM5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PRAMEF9Q5VWM5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
PRAMEF9Q5VWM5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PRAMEF9Q5VWM5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PRAMEF9Q5VWM5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PRAMEF9Q5VWM5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRAMEF9Q5VWM5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRAMEF9Q5VWM5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRAMEF9Q5VWM5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRAMEF9Q5VWM5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PRAMEF9Q5VWM5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.2■■□□□ 1.47
PRAMEF9Q5VWM5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PRAMEF9Q5VWM5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.2■■□□□ 1.46
PRAMEF9Q5VWM5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.2■■□□□ 1.46
PRAMEF9Q5VWM5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRAMEF9Q5VWM5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PRAMEF9Q5VWM5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PRAMEF9Q5VWM5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.19■■□□□ 1.46
PRAMEF9Q5VWM5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRAMEF9Q5VWM5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.19■■□□□ 1.46
PRAMEF9Q5VWM5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.19■■□□□ 1.46
PRAMEF9Q5VWM5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.19■■□□□ 1.46
PRAMEF9Q5VWM5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.18■■□□□ 1.46
PRAMEF9Q5VWM5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PRAMEF9Q5VWM5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PRAMEF9Q5VWM5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PRAMEF9Q5VWM5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.18■■□□□ 1.46
PRAMEF9Q5VWM5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.18■■□□□ 1.46
PRAMEF9Q5VWM5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PRAMEF9Q5VWM5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRAMEF9Q5VWM5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRAMEF9Q5VWM5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PRAMEF9Q5VWM5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PRAMEF9Q5VWM5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRAMEF9Q5VWM5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PRAMEF9Q5VWM5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRAMEF9Q5VWM5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
PRAMEF9Q5VWM5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRAMEF9Q5VWM5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRAMEF9Q5VWM5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRAMEF9Q5VWM5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.14■■□□□ 1.46
PRAMEF9Q5VWM5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRAMEF9Q5VWM5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRAMEF9Q5VWM5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PRAMEF9Q5VWM5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PRAMEF9Q5VWM5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PRAMEF9Q5VWM5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms