Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TMEM35AQ53FP2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.01■■□□□ 1.43
TMEM35AQ53FP2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.01■■□□□ 1.43
TMEM35AQ53FP2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24■■□□□ 1.43
TMEM35AQ53FP2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
TMEM35AQ53FP2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TMEM35AQ53FP2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24■■□□□ 1.43
TMEM35AQ53FP2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TMEM35AQ53FP2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TMEM35AQ53FP2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.99■■□□□ 1.43
TMEM35AQ53FP2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.99■■□□□ 1.43
TMEM35AQ53FP2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TMEM35AQ53FP2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM35AQ53FP2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TMEM35AQ53FP2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TMEM35AQ53FP2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TMEM35AQ53FP2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM35AQ53FP2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TMEM35AQ53FP2 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.97■■□□□ 1.43
TMEM35AQ53FP2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TMEM35AQ53FP2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM35AQ53FP2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM35AQ53FP2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TMEM35AQ53FP2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.96■■□□□ 1.43
TMEM35AQ53FP2 AC008813.1-201ENST00000536597 885 ntBASIC23.96■■□□□ 1.43
TMEM35AQ53FP2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TMEM35AQ53FP2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
TMEM35AQ53FP2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM35AQ53FP2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM35AQ53FP2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TMEM35AQ53FP2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TMEM35AQ53FP2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TMEM35AQ53FP2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TMEM35AQ53FP2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TMEM35AQ53FP2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
TMEM35AQ53FP2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM35AQ53FP2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TMEM35AQ53FP2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM35AQ53FP2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TMEM35AQ53FP2 MIR7108-201ENST00000614319 87 ntBASIC23.93■■□□□ 1.42
TMEM35AQ53FP2 CR559946.2-201ENST00000623684 991 ntBASIC23.93■■□□□ 1.42
TMEM35AQ53FP2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM35AQ53FP2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM35AQ53FP2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM35AQ53FP2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.92■■□□□ 1.42
TMEM35AQ53FP2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TMEM35AQ53FP2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TMEM35AQ53FP2 MIR3648-2-201ENST00000581792 180 ntBASIC23.91■■□□□ 1.42
TMEM35AQ53FP2 MIR3648-1-201ENST00000615959 180 ntBASIC23.91■■□□□ 1.42
TMEM35AQ53FP2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.9■■□□□ 1.42
TMEM35AQ53FP2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM35AQ53FP2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM35AQ53FP2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM35AQ53FP2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM35AQ53FP2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.89■■□□□ 1.41
TMEM35AQ53FP2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM35AQ53FP2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM35AQ53FP2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM35AQ53FP2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM35AQ53FP2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.87■■□□□ 1.41
TMEM35AQ53FP2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TMEM35AQ53FP2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM35AQ53FP2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM35AQ53FP2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.85■■□□□ 1.41
TMEM35AQ53FP2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TMEM35AQ53FP2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM35AQ53FP2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TMEM35AQ53FP2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
TMEM35AQ53FP2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TMEM35AQ53FP2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
TMEM35AQ53FP2 AC016575.1-201ENST00000607026 382 ntBASIC23.83■■□□□ 1.41
TMEM35AQ53FP2 AC148477.6-201ENST00000623746 465 ntBASIC23.83■■□□□ 1.41
TMEM35AQ53FP2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM35AQ53FP2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.83■■□□□ 1.4
TMEM35AQ53FP2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TMEM35AQ53FP2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TMEM35AQ53FP2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
TMEM35AQ53FP2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TMEM35AQ53FP2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TMEM35AQ53FP2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TMEM35AQ53FP2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35AQ53FP2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35AQ53FP2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35AQ53FP2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TMEM35AQ53FP2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.79■■□□□ 1.4
TMEM35AQ53FP2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35AQ53FP2 HLA-V-202ENST00000446817 847 ntBASIC23.78■■□□□ 1.4
TMEM35AQ53FP2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEM35AQ53FP2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35AQ53FP2 MIR219A2-201ENST00000608502 1504 ntBASIC23.77■■□□□ 1.4
TMEM35AQ53FP2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TMEM35AQ53FP2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms