Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 AFG3YER017C 2286 nt7.99□□□□□ -1.13
VPS38Q05919 PPZ2YDR436W 2133 nt7.99□□□□□ -1.13
VPS38Q05919 BAP3YDR046C 1815 nt7.99□□□□□ -1.13
VPS38Q05919 YLR173WYLR173W 1827 nt7.98□□□□□ -1.13
VPS38Q05919 SPR1YOR190W 1338 nt7.98□□□□□ -1.13
VPS38Q05919 ENB1YOL158C 1821 nt7.97□□□□□ -1.13
VPS38Q05919 LIP5YOR196C 1245 nt7.97□□□□□ -1.13
VPS38Q05919 SPS1YDR523C 1473 nt7.97□□□□□ -1.13
VPS38Q05919 ERG24YNL280C 1317 nt7.97□□□□□ -1.13
VPS38Q05919 PMA2YPL036W 2844 nt7.96□□□□□ -1.13
VPS38Q05919 PSA1YDL055C 1086 nt7.96□□□□□ -1.14
VPS38Q05919 PSP2YML017W 1782 nt7.96□□□□□ -1.14
VPS38Q05919 PNS1YOR161C 1620 nt7.96□□□□□ -1.14
VPS38Q05919 ATO2YNR002C 849 nt7.95□□□□□ -1.14
VPS38Q05919 FCY2YER056C 1602 nt7.95□□□□□ -1.14
VPS38Q05919 TOM71YHR117W 1920 nt7.95□□□□□ -1.14
VPS38Q05919 ELP4YPL101W 1371 nt7.95□□□□□ -1.14
VPS38Q05919 HRA1HRA1 564 nt7.94□□□□□ -1.14
VPS38Q05919 YNR001W-AYNR001W-A 219 nt7.94□□□□□ -1.14
VPS38Q05919 YPT10YBR264C 600 nt7.94□□□□□ -1.14
VPS38Q05919 CTF3YLR381W 2202 nt7.93□□□□□ -1.14
VPS38Q05919 NUP57YGR119C 1626 nt7.92□□□□□ -1.14
VPS38Q05919 HAC1YFL031W 717 nt7.92□□□□□ -1.14
VPS38Q05919 LOT6YLR011W 576 nt7.92□□□□□ -1.14
VPS38Q05919 CPT1YNL130C 1182 nt7.92□□□□□ -1.14
VPS38Q05919 RFS1YBR052C 633 nt7.92□□□□□ -1.14
VPS38Q05919 ERV2YPR037C 591 nt7.91□□□□□ -1.14
VPS38Q05919 EXG2YDR261C 1689 nt7.91□□□□□ -1.14
VPS38Q05919 TAD2YJL035C 753 nt7.9□□□□□ -1.14
VPS38Q05919 DSC3YOR223W 879 nt7.9□□□□□ -1.14
VPS38Q05919 SNF4YGL115W 969 nt7.88□□□□□ -1.15
VPS38Q05919 RDR1YOR380W 1641 nt7.88□□□□□ -1.15
VPS38Q05919 GDH1YOR375C 1365 nt7.87□□□□□ -1.15
VPS38Q05919 SKP1YDR328C 585 nt7.87□□□□□ -1.15
VPS38Q05919 STS1YIR011C 960 nt7.87□□□□□ -1.15
VPS38Q05919 RTG2YGL252C 1767 nt7.87□□□□□ -1.15
VPS38Q05919 MAS2YHR024C 1449 nt7.86□□□□□ -1.15
VPS38Q05919 NUP53YMR153W 1428 nt7.86□□□□□ -1.15
VPS38Q05919 OSM1YJR051W 1506 nt7.85□□□□□ -1.15
VPS38Q05919 YCR041WYCR041W 333 nt7.85□□□□□ -1.15
VPS38Q05919 PAB1YER165W 1734 nt7.84□□□□□ -1.15
VPS38Q05919 YOR012WYOR012W 414 nt7.84□□□□□ -1.15
VPS38Q05919 CDC3YLR314C 1563 nt7.84□□□□□ -1.15
VPS38Q05919 CDC7YDL017W 1524 nt7.83□□□□□ -1.16
VPS38Q05919 YJR142WYJR142W 1029 nt7.83□□□□□ -1.16
VPS38Q05919 SNU66YOR308C 1764 nt7.82□□□□□ -1.16
VPS38Q05919 YGR068W-AYGR068W-A 96 nt7.82□□□□□ -1.16
VPS38Q05919 AIM2YAL049C 741 nt7.82□□□□□ -1.16
VPS38Q05919 ADE1YAR015W 921 nt7.82□□□□□ -1.16
VPS38Q05919 NCA3YJL116C 1014 nt7.81□□□□□ -1.16
VPS38Q05919 YLR112WYLR112W 420 nt7.81□□□□□ -1.16
VPS38Q05919 YMR074CYMR074C 438 nt7.81□□□□□ -1.16
VPS38Q05919 MRP1YDR347W 966 nt7.8□□□□□ -1.16
VPS38Q05919 GRH1YDR517W 1119 nt7.8□□□□□ -1.16
VPS38Q05919 CCW12YLR110C 402 nt7.8□□□□□ -1.16
VPS38Q05919 CRN1YLR429W 1956 nt7.8□□□□□ -1.16
VPS38Q05919 HRB1YNL004W 1365 nt7.8□□□□□ -1.16
VPS38Q05919 PGI1YBR196C 1665 nt7.79□□□□□ -1.16
VPS38Q05919 NUP84YDL116W 2181 nt7.79□□□□□ -1.16
VPS38Q05919 YIA6YIL006W 1122 nt7.79□□□□□ -1.16
VPS38Q05919 ADE2YOR128C 1716 nt7.78□□□□□ -1.16
VPS38Q05919 SUF3tG(CCC)D 72 nt7.78□□□□□ -1.16
VPS38Q05919 AFG2YLR397C 2343 nt7.77□□□□□ -1.17
VPS38Q05919 YNL040WYNL040W 1371 nt7.77□□□□□ -1.17
VPS38Q05919 PAC10YGR078C 600 nt7.77□□□□□ -1.17
VPS38Q05919 SUN4YNL066W 1263 nt7.77□□□□□ -1.17
VPS38Q05919 NMA2YGR010W 1188 nt7.76□□□□□ -1.17
VPS38Q05919 NAS6YGR232W 687 nt7.76□□□□□ -1.17
VPS38Q05919 SRF1YDL133W 1314 nt7.76□□□□□ -1.17
VPS38Q05919 YBL111CYBL111C 2004 nt7.75□□□□□ -1.17
VPS38Q05919 HHY1YEL059W 309 nt7.75□□□□□ -1.17
VPS38Q05919 ERG27YLR100W 1044 nt7.75□□□□□ -1.17
VPS38Q05919 PHO85YPL031C 918 nt7.75□□□□□ -1.17
VPS38Q05919 PPS1YBR276C 2424 nt7.75□□□□□ -1.17
VPS38Q05919 YIL108WYIL108W 2091 nt7.74□□□□□ -1.17
VPS38Q05919 PIL1YGR086C 1020 nt7.74□□□□□ -1.17
VPS38Q05919 YJL213WYJL213W 996 nt7.74□□□□□ -1.17
VPS38Q05919 TOS1YBR162C 1368 nt7.73□□□□□ -1.17
VPS38Q05919 GCD11YER025W 1584 nt7.73□□□□□ -1.17
VPS38Q05919 YDR476CYDR476C 675 nt7.72□□□□□ -1.17
VPS38Q05919 PET117YER058W 324 nt7.72□□□□□ -1.17
VPS38Q05919 MHP1YJL042W 4197 nt7.72□□□□□ -1.17
VPS38Q05919 tL(UAA)B1tL(UAA)B1 84 nt7.71□□□□□ -1.18
VPS38Q05919 tL(UAA)B2tL(UAA)B2 84 nt7.71□□□□□ -1.18
VPS38Q05919 tL(UAA)DtL(UAA)D 84 nt7.71□□□□□ -1.18
VPS38Q05919 SUP51tL(UAA)J 84 nt7.71□□□□□ -1.18
VPS38Q05919 tL(UAA)KtL(UAA)K 84 nt7.71□□□□□ -1.18
VPS38Q05919 tL(UAA)LtL(UAA)L 84 nt7.71□□□□□ -1.18
VPS38Q05919 YGL081WYGL081W 963 nt7.71□□□□□ -1.18
VPS38Q05919 tL(UAA)NtL(UAA)N 84 nt7.71□□□□□ -1.18
VPS38Q05919 MSI1YBR195C 1269 nt7.71□□□□□ -1.18
VPS38Q05919 RPL43AYPR043W 279 nt7.7□□□□□ -1.18
VPS38Q05919 SNT309YPR101W 528 nt7.7□□□□□ -1.18
VPS38Q05919 SOD2YHR008C 702 nt7.69□□□□□ -1.18
VPS38Q05919 YPR127WYPR127W 1038 nt7.69□□□□□ -1.18
VPS38Q05919 SDH8YBR269C 417 nt7.69□□□□□ -1.18
VPS38Q05919 TDP1YBR223C 1635 nt7.69□□□□□ -1.18
VPS38Q05919 SEC23YPR181C 2307 nt7.68□□□□□ -1.18
VPS38Q05919 NDE1YMR145C 1683 nt7.68□□□□□ -1.18
VPS38Q05919 DMC1YER179W 1005 nt7.68□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms