Protein–RNA interactions for Protein: Q03938

ZNF90, Zinc finger protein 90, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF90Q03938 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF90Q03938 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.83■□□□□ 0.76
ZNF90Q03938 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF90Q03938 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ZNF90Q03938 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF90Q03938 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF90Q03938 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF90Q03938 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF90Q03938 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.82■□□□□ 0.76
ZNF90Q03938 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF90Q03938 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF90Q03938 AP002414.2-202ENST00000590929 1450 ntBASIC19.81■□□□□ 0.76
ZNF90Q03938 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.81■□□□□ 0.76
ZNF90Q03938 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF90Q03938 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF90Q03938 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF90Q03938 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF90Q03938 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF90Q03938 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF90Q03938 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF90Q03938 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ZNF90Q03938 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF90Q03938 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF90Q03938 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF90Q03938 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.78■□□□□ 0.76
ZNF90Q03938 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF90Q03938 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF90Q03938 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF90Q03938 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF90Q03938 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF90Q03938 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF90Q03938 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ZNF90Q03938 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF90Q03938 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF90Q03938 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF90Q03938 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF90Q03938 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF90Q03938 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
ZNF90Q03938 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF90Q03938 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
ZNF90Q03938 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ZNF90Q03938 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF90Q03938 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF90Q03938 AC005559.1-201ENST00000589661 871 ntBASIC19.76■□□□□ 0.75
ZNF90Q03938 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF90Q03938 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ZNF90Q03938 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF90Q03938 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF90Q03938 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF90Q03938 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF90Q03938 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF90Q03938 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF90Q03938 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF90Q03938 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF90Q03938 AC135983.2-203ENST00000454486 1613 ntBASIC19.74■□□□□ 0.75
ZNF90Q03938 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF90Q03938 AL449106.1-201ENST00000608517 1980 ntBASIC19.74■□□□□ 0.75
ZNF90Q03938 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF90Q03938 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF90Q03938 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF90Q03938 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ZNF90Q03938 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF90Q03938 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF90Q03938 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF90Q03938 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF90Q03938 SUZ12P1-203ENST00000578195 985 ntBASIC19.72■□□□□ 0.75
ZNF90Q03938 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF90Q03938 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF90Q03938 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF90Q03938 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF90Q03938 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF90Q03938 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF90Q03938 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.71■□□□□ 0.75
ZNF90Q03938 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF90Q03938 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF90Q03938 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF90Q03938 WHAMMP2-203ENST00000563942 1603 ntBASIC19.71■□□□□ 0.75
ZNF90Q03938 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF90Q03938 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF90Q03938 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF90Q03938 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF90Q03938 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF90Q03938 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ZNF90Q03938 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF90Q03938 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF90Q03938 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF90Q03938 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF90Q03938 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF90Q03938 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF90Q03938 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF90Q03938 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF90Q03938 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNF90Q03938 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF90Q03938 AC108673.1-201ENST00000510422 1159 ntBASIC19.68■□□□□ 0.74
ZNF90Q03938 MIR6090-201ENST00000622481 60 ntBASIC19.68■□□□□ 0.74
ZNF90Q03938 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF90Q03938 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF90Q03938 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF90Q03938 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF90Q03938 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms