Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL20P78556 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL20P78556 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL20P78556 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.85■□□□□ 0.77
CCL20P78556 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL20P78556 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL20P78556 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL20P78556 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL20P78556 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCL20P78556 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.84■□□□□ 0.77
CCL20P78556 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.84■□□□□ 0.77
CCL20P78556 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL20P78556 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.83■□□□□ 0.77
CCL20P78556 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.83■□□□□ 0.76
CCL20P78556 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCL20P78556 DUSP8P4-201ENST00000399538 1761 ntBASIC19.83■□□□□ 0.76
CCL20P78556 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCL20P78556 WASH5P-204ENST00000632292 975 ntBASIC19.82■□□□□ 0.76
CCL20P78556 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCL20P78556 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCL20P78556 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.81■□□□□ 0.76
CCL20P78556 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCL20P78556 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL20P78556 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCL20P78556 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.81■□□□□ 0.76
CCL20P78556 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.81■□□□□ 0.76
CCL20P78556 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL20P78556 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL20P78556 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL20P78556 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL20P78556 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCL20P78556 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCL20P78556 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCL20P78556 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL20P78556 AC100797.4-201ENST00000631653 1827 ntBASIC19.79■□□□□ 0.76
CCL20P78556 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL20P78556 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL20P78556 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCL20P78556 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.79■□□□□ 0.76
CCL20P78556 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL20P78556 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL20P78556 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCL20P78556 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL20P78556 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL20P78556 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL20P78556 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL20P78556 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL20P78556 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCL20P78556 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL20P78556 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL20P78556 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL20P78556 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCL20P78556 AC092803.2-201ENST00000564287 1899 ntBASIC19.75■□□□□ 0.75
CCL20P78556 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL20P78556 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL20P78556 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL20P78556 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCL20P78556 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL20P78556 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL20P78556 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL20P78556 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL20P78556 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.74■□□□□ 0.75
CCL20P78556 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL20P78556 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL20P78556 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCL20P78556 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL20P78556 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL20P78556 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCL20P78556 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL20P78556 DYNLL1-208ENST00000550178 581 ntBASIC19.73■□□□□ 0.75
CCL20P78556 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL20P78556 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL20P78556 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL20P78556 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL20P78556 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL20P78556 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL20P78556 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL20P78556 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCL20P78556 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL20P78556 AC133561.1-201ENST00000568600 2415 ntBASIC19.7■□□□□ 0.74
CCL20P78556 AP002414.2-202ENST00000590929 1450 ntBASIC19.7■□□□□ 0.74
CCL20P78556 ERN1-208ENST00000606895 2068 ntBASIC19.7■□□□□ 0.74
CCL20P78556 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL20P78556 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCL20P78556 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL20P78556 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCL20P78556 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCL20P78556 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL20P78556 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL20P78556 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCL20P78556 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL20P78556 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL20P78556 AC127502.1-201ENST00000399971 1502 ntBASIC19.68■□□□□ 0.74
CCL20P78556 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL20P78556 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
CCL20P78556 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL20P78556 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCL20P78556 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL20P78556 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL20P78556 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms