Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
EIF4A1P60842 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
EIF4A1P60842 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
EIF4A1P60842 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
EIF4A1P60842 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.66■■■□□ 2.82
EIF4A1P60842 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
EIF4A1P60842 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.66■■■□□ 2.82
EIF4A1P60842 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
EIF4A1P60842 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.65■■■□□ 2.82
EIF4A1P60842 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
EIF4A1P60842 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.64■■■□□ 2.82
EIF4A1P60842 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
EIF4A1P60842 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.63■■■□□ 2.81
EIF4A1P60842 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
EIF4A1P60842 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.63■■■□□ 2.81
EIF4A1P60842 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
EIF4A1P60842 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
EIF4A1P60842 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
EIF4A1P60842 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.6■■■□□ 2.81
EIF4A1P60842 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
EIF4A1P60842 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
EIF4A1P60842 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
EIF4A1P60842 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.58■■■□□ 2.81
EIF4A1P60842 ABHD17AP5-201ENST00000580133 923 ntBASIC32.58■■■□□ 2.81
EIF4A1P60842 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
EIF4A1P60842 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
EIF4A1P60842 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.58■■■□□ 2.81
EIF4A1P60842 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.58■■■□□ 2.81
EIF4A1P60842 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
EIF4A1P60842 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.57■■■□□ 2.8
EIF4A1P60842 AP002414.2-202ENST00000590929 1450 ntBASIC32.57■■■□□ 2.8
EIF4A1P60842 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.57■■■□□ 2.8
EIF4A1P60842 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.56■■■□□ 2.8
EIF4A1P60842 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
EIF4A1P60842 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
EIF4A1P60842 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
EIF4A1P60842 AC092296.2-201ENST00000589470 999 ntBASIC32.55■■■□□ 2.8
EIF4A1P60842 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
EIF4A1P60842 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
EIF4A1P60842 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
EIF4A1P60842 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.53■■■□□ 2.8
EIF4A1P60842 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.53■■■□□ 2.8
EIF4A1P60842 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
EIF4A1P60842 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
EIF4A1P60842 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
EIF4A1P60842 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
EIF4A1P60842 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
EIF4A1P60842 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.8
EIF4A1P60842 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
EIF4A1P60842 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
EIF4A1P60842 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
EIF4A1P60842 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
EIF4A1P60842 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
EIF4A1P60842 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
EIF4A1P60842 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
EIF4A1P60842 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
EIF4A1P60842 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
EIF4A1P60842 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
EIF4A1P60842 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
EIF4A1P60842 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
EIF4A1P60842 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
EIF4A1P60842 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
EIF4A1P60842 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.47■■■□□ 2.79
EIF4A1P60842 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
EIF4A1P60842 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
EIF4A1P60842 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
EIF4A1P60842 AL157400.5-201ENST00000507624 621 ntBASIC32.46■■■□□ 2.79
EIF4A1P60842 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.45■■■□□ 2.79
EIF4A1P60842 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
EIF4A1P60842 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
EIF4A1P60842 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
EIF4A1P60842 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
EIF4A1P60842 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.44■■■□□ 2.78
EIF4A1P60842 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.44■■■□□ 2.78
EIF4A1P60842 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
EIF4A1P60842 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
EIF4A1P60842 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
EIF4A1P60842 AC126177.7-201ENST00000547904 679 ntBASIC32.43■■■□□ 2.78
EIF4A1P60842 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
EIF4A1P60842 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
EIF4A1P60842 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
EIF4A1P60842 ECEL1P2-201ENST00000461596 1295 ntBASIC32.41■■■□□ 2.78
EIF4A1P60842 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.41■■■□□ 2.78
EIF4A1P60842 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
EIF4A1P60842 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.41■■■□□ 2.78
EIF4A1P60842 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
EIF4A1P60842 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
EIF4A1P60842 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
EIF4A1P60842 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.4■■■□□ 2.78
EIF4A1P60842 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
EIF4A1P60842 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.4■■■□□ 2.78
EIF4A1P60842 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.39■■■□□ 2.78
EIF4A1P60842 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
EIF4A1P60842 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
EIF4A1P60842 AC139426.1-201ENST00000568218 2529 ntBASIC32.38■■■□□ 2.77
EIF4A1P60842 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
EIF4A1P60842 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
EIF4A1P60842 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.38■■■□□ 2.77
EIF4A1P60842 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
EIF4A1P60842 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms