Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.87■■□□□ 1.73
PMS2P54278 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PMS2P54278 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PMS2P54278 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.86■■□□□ 1.73
PMS2P54278 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PMS2P54278 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
PMS2P54278 MIR3665-201ENST00000578708 105 ntBASIC25.85■■□□□ 1.73
PMS2P54278 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.85■■□□□ 1.73
PMS2P54278 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PMS2P54278 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.85■■□□□ 1.73
PMS2P54278 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.84■■□□□ 1.73
PMS2P54278 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PMS2P54278 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.84■■□□□ 1.73
PMS2P54278 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.83■■□□□ 1.72
PMS2P54278 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.82■■□□□ 1.72
PMS2P54278 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PMS2P54278 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PMS2P54278 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PMS2P54278 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PMS2P54278 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.8■■□□□ 1.72
PMS2P54278 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PMS2P54278 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.8■■□□□ 1.72
PMS2P54278 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PMS2P54278 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.8■■□□□ 1.72
PMS2P54278 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PMS2P54278 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PMS2P54278 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PMS2P54278 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PMS2P54278 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PMS2P54278 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PMS2P54278 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.79■■□□□ 1.72
PMS2P54278 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.79■■□□□ 1.72
PMS2P54278 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
PMS2P54278 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PMS2P54278 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PMS2P54278 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PMS2P54278 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PMS2P54278 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.77■■□□□ 1.72
PMS2P54278 AC145676.1-201ENST00000514988 2004 ntBASIC25.76■■□□□ 1.72
PMS2P54278 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PMS2P54278 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PMS2P54278 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.76■■□□□ 1.71
PMS2P54278 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PMS2P54278 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PMS2P54278 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PMS2P54278 AC018358.1-201ENST00000631079 1402 ntBASIC25.74■■□□□ 1.71
PMS2P54278 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PMS2P54278 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PMS2P54278 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.73■■□□□ 1.71
PMS2P54278 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
PMS2P54278 AC020928.2-201ENST00000588717 2197 ntBASIC25.72■■□□□ 1.71
PMS2P54278 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
PMS2P54278 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PMS2P54278 AC087741.3-201ENST00000624270 1347 ntBASIC25.71■■□□□ 1.71
PMS2P54278 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.71■■□□□ 1.71
PMS2P54278 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PMS2P54278 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.71■■□□□ 1.71
PMS2P54278 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PMS2P54278 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.7■■□□□ 1.7
PMS2P54278 DUX4L28-201ENST00000623687 678 ntBASIC25.7■■□□□ 1.7
PMS2P54278 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.7■■□□□ 1.7
PMS2P54278 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
PMS2P54278 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PMS2P54278 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PMS2P54278 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.69■■□□□ 1.7
PMS2P54278 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.68■■□□□ 1.7
PMS2P54278 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMS2P54278 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMS2P54278 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.68■■□□□ 1.7
PMS2P54278 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PMS2P54278 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PMS2P54278 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PMS2P54278 MIR762-201ENST00000390236 83 ntBASIC25.67■■□□□ 1.7
PMS2P54278 ABHD17AP4-201ENST00000411545 909 ntBASIC25.67■■□□□ 1.7
PMS2P54278 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.67■■□□□ 1.7
PMS2P54278 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.67■■□□□ 1.7
PMS2P54278 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
PMS2P54278 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.66■■□□□ 1.7
PMS2P54278 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PMS2P54278 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PMS2P54278 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PMS2P54278 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PMS2P54278 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.66■■□□□ 1.7
PMS2P54278 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMS2P54278 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PMS2P54278 AC044849.2-201ENST00000606596 710 ntBASIC25.65■■□□□ 1.7
PMS2P54278 MIR7108-201ENST00000614319 87 ntBASIC25.65■■□□□ 1.7
PMS2P54278 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PMS2P54278 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
PMS2P54278 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PMS2P54278 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PMS2P54278 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PMS2P54278 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PMS2P54278 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PMS2P54278 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PMS2P54278 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PMS2P54278 AC005559.1-201ENST00000589661 871 ntBASIC25.63■■□□□ 1.69
PMS2P54278 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PMS2P54278 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.63■■□□□ 1.69
PMS2P54278 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms