Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC100797.4-201ENST00000631653 1827 ntBASIC26.09■■□□□ 1.77
MMP13P45452 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.09■■□□□ 1.77
MMP13P45452 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.09■■□□□ 1.77
MMP13P45452 ABHD17AP4-201ENST00000411545 909 ntBASIC26.09■■□□□ 1.77
MMP13P45452 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.09■■□□□ 1.77
MMP13P45452 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
MMP13P45452 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.09■■□□□ 1.77
MMP13P45452 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
MMP13P45452 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.08■■□□□ 1.77
MMP13P45452 ZNRF2P2-203ENST00000454624 420 ntBASIC26.08■■□□□ 1.77
MMP13P45452 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.08■■□□□ 1.77
MMP13P45452 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
MMP13P45452 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.07■■□□□ 1.76
MMP13P45452 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
MMP13P45452 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
MMP13P45452 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.07■■□□□ 1.76
MMP13P45452 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
MMP13P45452 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
MMP13P45452 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
MMP13P45452 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
MMP13P45452 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.05■■□□□ 1.76
MMP13P45452 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
MMP13P45452 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.04■■□□□ 1.76
MMP13P45452 LINC01971-201ENST00000617888 1048 ntBASIC26.04■■□□□ 1.76
MMP13P45452 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MMP13P45452 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MMP13P45452 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.03■■□□□ 1.76
MMP13P45452 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
MMP13P45452 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.02■■□□□ 1.76
MMP13P45452 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.02■■□□□ 1.76
MMP13P45452 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
MMP13P45452 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
MMP13P45452 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
MMP13P45452 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.02■■□□□ 1.76
MMP13P45452 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
MMP13P45452 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
MMP13P45452 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
MMP13P45452 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
MMP13P45452 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.99■■□□□ 1.75
MMP13P45452 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
MMP13P45452 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.98■■□□□ 1.75
MMP13P45452 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP13P45452 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.97■■□□□ 1.75
MMP13P45452 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.97■■□□□ 1.75
MMP13P45452 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
MMP13P45452 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.97■■□□□ 1.75
MMP13P45452 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.97■■□□□ 1.75
MMP13P45452 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MMP13P45452 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MMP13P45452 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MMP13P45452 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.96■■□□□ 1.75
MMP13P45452 AL449106.1-201ENST00000608517 1980 ntBASIC25.96■■□□□ 1.75
MMP13P45452 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.95■■□□□ 1.74
MMP13P45452 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.95■■□□□ 1.74
MMP13P45452 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.95■■□□□ 1.74
MMP13P45452 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.95■■□□□ 1.74
MMP13P45452 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
MMP13P45452 DUX4L11-201ENST00000611504 1267 ntBASIC25.94■■□□□ 1.74
MMP13P45452 DUX4L12-201ENST00000614593 1267 ntBASIC25.94■■□□□ 1.74
MMP13P45452 DUX4L14-201ENST00000621227 1267 ntBASIC25.94■■□□□ 1.74
MMP13P45452 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
MMP13P45452 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.94■■□□□ 1.74
MMP13P45452 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
MMP13P45452 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
MMP13P45452 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
MMP13P45452 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
MMP13P45452 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
MMP13P45452 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.92■■□□□ 1.74
MMP13P45452 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
MMP13P45452 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.91■■□□□ 1.74
MMP13P45452 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.91■■□□□ 1.74
MMP13P45452 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
MMP13P45452 LINC01003-201ENST00000564834 1764 ntBASIC25.9■■□□□ 1.74
MMP13P45452 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
MMP13P45452 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
MMP13P45452 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
MMP13P45452 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L13-201ENST00000554103 1267 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L15-201ENST00000611059 1267 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L23-201ENST00000615195 1269 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L24-201ENST00000617576 1269 ntBASIC25.89■■□□□ 1.74
MMP13P45452 DUX4L22-201ENST00000618238 1269 ntBASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms