Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP24386 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CHMP24386 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CHMP24386 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP24386 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP24386 LINC01003-201ENST00000564834 1764 ntBASIC23.38■■□□□ 1.33
CHMP24386 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CHMP24386 DUX4L11-201ENST00000611504 1267 ntBASIC23.38■■□□□ 1.33
CHMP24386 DUX4L12-201ENST00000614593 1267 ntBASIC23.38■■□□□ 1.33
CHMP24386 DUX4L14-201ENST00000621227 1267 ntBASIC23.38■■□□□ 1.33
CHMP24386 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP24386 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
CHMP24386 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHMP24386 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHMP24386 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHMP24386 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP24386 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP24386 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.36■■□□□ 1.33
CHMP24386 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP24386 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.35■■□□□ 1.33
CHMP24386 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.35■■□□□ 1.33
CHMP24386 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
CHMP24386 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CHMP24386 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.35■■□□□ 1.33
CHMP24386 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.35■■□□□ 1.33
CHMP24386 HLA-V-202ENST00000446817 847 ntBASIC23.35■■□□□ 1.33
CHMP24386 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP24386 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP24386 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.34■■□□□ 1.33
CHMP24386 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.34■■□□□ 1.33
CHMP24386 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHMP24386 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.33■■□□□ 1.33
CHMP24386 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP24386 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.33■■□□□ 1.33
CHMP24386 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.33■■□□□ 1.33
CHMP24386 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP24386 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CHMP24386 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP24386 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.32■■□□□ 1.32
CHMP24386 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.32■■□□□ 1.32
CHMP24386 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP24386 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.31■■□□□ 1.32
CHMP24386 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP24386 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.31■■□□□ 1.32
CHMP24386 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP24386 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP24386 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHMP24386 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHMP24386 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CHMP24386 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.29■■□□□ 1.32
CHMP24386 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHMP24386 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.29■■□□□ 1.32
CHMP24386 DUX4L13-201ENST00000554103 1267 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L15-201ENST00000611059 1267 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L23-201ENST00000615195 1269 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L24-201ENST00000617576 1269 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L22-201ENST00000618238 1269 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L20-201ENST00000619712 1269 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L21-201ENST00000622058 1269 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L10-201ENST00000622460 1267 ntBASIC23.29■■□□□ 1.32
CHMP24386 DUX4L25-201ENST00000624915 1269 ntBASIC23.29■■□□□ 1.32
CHMP24386 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.29■■□□□ 1.32
CHMP24386 AC135983.2-203ENST00000454486 1613 ntBASIC23.29■■□□□ 1.32
CHMP24386 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.29■■□□□ 1.32
CHMP24386 MIR3648-2-201ENST00000581792 180 ntBASIC23.28■■□□□ 1.32
CHMP24386 MIR3648-1-201ENST00000615959 180 ntBASIC23.28■■□□□ 1.32
CHMP24386 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHMP24386 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHMP24386 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHMP24386 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP24386 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP24386 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.27■■□□□ 1.32
CHMP24386 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP24386 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP24386 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CHMP24386 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP24386 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP24386 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHMP24386 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHMP24386 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHMP24386 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CHMP24386 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.26■■□□□ 1.31
CHMP24386 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.26■■□□□ 1.31
CHMP24386 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHMP24386 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
CHMP24386 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.25■■□□□ 1.31
CHMP24386 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CHMP24386 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.25■■□□□ 1.31
CHMP24386 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHMP24386 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHMP24386 AC100797.4-201ENST00000631653 1827 ntBASIC23.24■■□□□ 1.31
CHMP24386 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP24386 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP24386 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP24386 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHMP24386 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHMP24386 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHMP24386 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CHMP24386 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.23■■□□□ 1.31
CHMP24386 CR559946.2-201ENST00000623684 991 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms