Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD28P10747 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD28P10747 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CD28P10747 AC100797.4-201ENST00000631653 1827 ntBASIC19.7■□□□□ 0.74
CD28P10747 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD28P10747 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.7■□□□□ 0.74
CD28P10747 AP004833.2-201ENST00000532228 1454 ntBASIC19.7■□□□□ 0.74
CD28P10747 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CD28P10747 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD28P10747 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD28P10747 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD28P10747 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.68■□□□□ 0.74
CD28P10747 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD28P10747 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.68■□□□□ 0.74
CD28P10747 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD28P10747 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.67■□□□□ 0.74
CD28P10747 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.67■□□□□ 0.74
CD28P10747 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD28P10747 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.66■□□□□ 0.74
CD28P10747 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.66■□□□□ 0.74
CD28P10747 AC126177.7-201ENST00000547904 679 ntBASIC19.66■□□□□ 0.74
CD28P10747 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.66■□□□□ 0.74
CD28P10747 AC012354.3-201ENST00000623734 483 ntBASIC19.66■□□□□ 0.74
CD28P10747 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD28P10747 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.66■□□□□ 0.74
CD28P10747 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD28P10747 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD28P10747 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.65■□□□□ 0.74
CD28P10747 AC092296.2-201ENST00000589470 999 ntBASIC19.65■□□□□ 0.74
CD28P10747 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.65■□□□□ 0.74
CD28P10747 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD28P10747 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.65■□□□□ 0.74
CD28P10747 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD28P10747 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.65■□□□□ 0.74
CD28P10747 U85056.1-201ENST00000616429 682 ntBASIC19.64■□□□□ 0.73
CD28P10747 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD28P10747 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.64■□□□□ 0.73
CD28P10747 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD28P10747 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD28P10747 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CD28P10747 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD28P10747 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD28P10747 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD28P10747 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD28P10747 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.62■□□□□ 0.73
CD28P10747 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD28P10747 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CD28P10747 ECEL1P2-201ENST00000461596 1295 ntBASIC19.61■□□□□ 0.73
CD28P10747 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD28P10747 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.61■□□□□ 0.73
CD28P10747 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD28P10747 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.6■□□□□ 0.73
CD28P10747 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD28P10747 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD28P10747 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD28P10747 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.6■□□□□ 0.73
CD28P10747 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD28P10747 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD28P10747 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CD28P10747 AL033527.3-201ENST00000566366 1196 ntBASIC19.59■□□□□ 0.73
CD28P10747 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.59■□□□□ 0.73
CD28P10747 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CD28P10747 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.58■□□□□ 0.72
CD28P10747 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.58■□□□□ 0.72
CD28P10747 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD28P10747 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD28P10747 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.57■□□□□ 0.72
CD28P10747 AL139393.2-201ENST00000608721 2025 ntBASIC19.57■□□□□ 0.72
CD28P10747 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD28P10747 AC018358.1-201ENST00000631079 1402 ntBASIC19.57■□□□□ 0.72
CD28P10747 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD28P10747 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD28P10747 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CD28P10747 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD28P10747 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD28P10747 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.56■□□□□ 0.72
CD28P10747 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD28P10747 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD28P10747 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.55■□□□□ 0.72
CD28P10747 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD28P10747 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CD28P10747 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CD28P10747 AL157400.5-201ENST00000507624 621 ntBASIC19.55■□□□□ 0.72
CD28P10747 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.55■□□□□ 0.72
CD28P10747 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CD28P10747 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD28P10747 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD28P10747 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD28P10747 ABCB10P3-201ENST00000561950 2166 ntBASIC19.54■□□□□ 0.72
CD28P10747 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.54■□□□□ 0.72
CD28P10747 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD28P10747 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CD28P10747 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CD28P10747 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CD28P10747 KRT18P60-201ENST00000312876 1297 ntBASIC19.53■□□□□ 0.72
CD28P10747 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CD28P10747 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CD28P10747 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CD28P10747 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD28P10747 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms