Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.41■■□□□ 1.82
RARAP10276 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
RARAP10276 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RARAP10276 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RARAP10276 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.4■■□□□ 1.82
RARAP10276 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RARAP10276 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RARAP10276 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.39■■□□□ 1.81
RARAP10276 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
RARAP10276 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RARAP10276 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.38■■□□□ 1.81
RARAP10276 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RARAP10276 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.38■■□□□ 1.81
RARAP10276 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.38■■□□□ 1.81
RARAP10276 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RARAP10276 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RARAP10276 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RARAP10276 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RARAP10276 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RARAP10276 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
RARAP10276 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
RARAP10276 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.35■■□□□ 1.81
RARAP10276 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RARAP10276 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RARAP10276 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.35■■□□□ 1.81
RARAP10276 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
RARAP10276 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RARAP10276 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RARAP10276 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.34■■□□□ 1.81
RARAP10276 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.33■■□□□ 1.81
RARAP10276 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
RARAP10276 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RARAP10276 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.33■■□□□ 1.81
RARAP10276 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RARAP10276 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.32■■□□□ 1.8
RARAP10276 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.32■■□□□ 1.8
RARAP10276 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
RARAP10276 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
RARAP10276 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.32■■□□□ 1.8
RARAP10276 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RARAP10276 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.31■■□□□ 1.8
RARAP10276 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RARAP10276 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
RARAP10276 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RARAP10276 AC018358.1-201ENST00000631079 1402 ntBASIC26.31■■□□□ 1.8
RARAP10276 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RARAP10276 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RARAP10276 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RARAP10276 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RARAP10276 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RARAP10276 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.28■■□□□ 1.8
RARAP10276 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RARAP10276 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RARAP10276 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RARAP10276 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RARAP10276 AC110285.7-201ENST00000624417 1536 ntBASIC26.28■■□□□ 1.8
RARAP10276 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RARAP10276 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RARAP10276 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RARAP10276 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.27■■□□□ 1.8
RARAP10276 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RARAP10276 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.26■■□□□ 1.79
RARAP10276 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
RARAP10276 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RARAP10276 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
RARAP10276 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RARAP10276 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.25■■□□□ 1.79
RARAP10276 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RARAP10276 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.24■■□□□ 1.79
RARAP10276 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.24■■□□□ 1.79
RARAP10276 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RARAP10276 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.23■■□□□ 1.79
RARAP10276 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RARAP10276 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RARAP10276 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RARAP10276 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RARAP10276 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RARAP10276 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RARAP10276 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RARAP10276 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RARAP10276 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RARAP10276 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RARAP10276 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RARAP10276 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.21■■□□□ 1.79
RARAP10276 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
RARAP10276 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
RARAP10276 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.2■■□□□ 1.78
RARAP10276 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.2■■□□□ 1.78
RARAP10276 LINC01971-201ENST00000617888 1048 ntBASIC26.2■■□□□ 1.78
RARAP10276 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.2■■□□□ 1.78
RARAP10276 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RARAP10276 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
RARAP10276 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RARAP10276 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.19■■□□□ 1.78
RARAP10276 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.19■■□□□ 1.78
RARAP10276 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RARAP10276 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RARAP10276 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.18■■□□□ 1.78
RARAP10276 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.18■■□□□ 1.78
RARAP10276 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms