Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IGHV3-43DP0DP04 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IGHV3-43DP0DP04 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IGHV3-43DP0DP04 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.8■□□□□ 0.92
IGHV3-43DP0DP04 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGHV3-43DP0DP04 AC018358.1-201ENST00000631079 1402 ntBASIC20.78■□□□□ 0.92
IGHV3-43DP0DP04 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43DP0DP04 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43DP0DP04 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43DP0DP04 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IGHV3-43DP0DP04 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IGHV3-43DP0DP04 AC110285.7-201ENST00000624417 1536 ntBASIC20.77■□□□□ 0.92
IGHV3-43DP0DP04 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGHV3-43DP0DP04 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IGHV3-43DP0DP04 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.75■□□□□ 0.91
IGHV3-43DP0DP04 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.75■□□□□ 0.91
IGHV3-43DP0DP04 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
IGHV3-43DP0DP04 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IGHV3-43DP0DP04 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IGHV3-43DP0DP04 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IGHV3-43DP0DP04 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IGHV3-43DP0DP04 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.73■□□□□ 0.91
IGHV3-43DP0DP04 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IGHV3-43DP0DP04 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
IGHV3-43DP0DP04 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
IGHV3-43DP0DP04 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IGHV3-43DP0DP04 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IGHV3-43DP0DP04 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IGHV3-43DP0DP04 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IGHV3-43DP0DP04 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
IGHV3-43DP0DP04 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.71■□□□□ 0.91
IGHV3-43DP0DP04 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IGHV3-43DP0DP04 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
IGHV3-43DP0DP04 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IGHV3-43DP0DP04 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
IGHV3-43DP0DP04 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43DP0DP04 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43DP0DP04 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.69■□□□□ 0.9
IGHV3-43DP0DP04 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.69■□□□□ 0.9
IGHV3-43DP0DP04 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43DP0DP04 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGHV3-43DP0DP04 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.68■□□□□ 0.9
IGHV3-43DP0DP04 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
IGHV3-43DP0DP04 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
IGHV3-43DP0DP04 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGHV3-43DP0DP04 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
IGHV3-43DP0DP04 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGHV3-43DP0DP04 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGHV3-43DP0DP04 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
IGHV3-43DP0DP04 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.67■□□□□ 0.9
IGHV3-43DP0DP04 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGHV3-43DP0DP04 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGHV3-43DP0DP04 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGHV3-43DP0DP04 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.66■□□□□ 0.9
IGHV3-43DP0DP04 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.66■□□□□ 0.9
IGHV3-43DP0DP04 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.66■□□□□ 0.9
IGHV3-43DP0DP04 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGHV3-43DP0DP04 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
IGHV3-43DP0DP04 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGHV3-43DP0DP04 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGHV3-43DP0DP04 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGHV3-43DP0DP04 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
IGHV3-43DP0DP04 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.65■□□□□ 0.9
IGHV3-43DP0DP04 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.64■□□□□ 0.9
IGHV3-43DP0DP04 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGHV3-43DP0DP04 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGHV3-43DP0DP04 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.64■□□□□ 0.89
IGHV3-43DP0DP04 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGHV3-43DP0DP04 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGHV3-43DP0DP04 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
IGHV3-43DP0DP04 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
IGHV3-43DP0DP04 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.64■□□□□ 0.89
IGHV3-43DP0DP04 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGHV3-43DP0DP04 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.63■□□□□ 0.89
IGHV3-43DP0DP04 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.63■□□□□ 0.89
IGHV3-43DP0DP04 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.63■□□□□ 0.89
IGHV3-43DP0DP04 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.63■□□□□ 0.89
IGHV3-43DP0DP04 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms