Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCNYL3P0C7X3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCNYL3P0C7X3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.16■■□□□ 1.46
CCNYL3P0C7X3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCNYL3P0C7X3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.15■■□□□ 1.46
CCNYL3P0C7X3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCNYL3P0C7X3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCNYL3P0C7X3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCNYL3P0C7X3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCNYL3P0C7X3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.13■■□□□ 1.45
CCNYL3P0C7X3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CCNYL3P0C7X3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.13■■□□□ 1.45
CCNYL3P0C7X3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCNYL3P0C7X3 AC148477.6-201ENST00000623746 465 ntBASIC24.12■■□□□ 1.45
CCNYL3P0C7X3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CCNYL3P0C7X3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CCNYL3P0C7X3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCNYL3P0C7X3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCNYL3P0C7X3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCNYL3P0C7X3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.1■■□□□ 1.45
CCNYL3P0C7X3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCNYL3P0C7X3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCNYL3P0C7X3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CCNYL3P0C7X3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.08■■□□□ 1.45
CCNYL3P0C7X3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
CCNYL3P0C7X3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCNYL3P0C7X3 AL139393.2-201ENST00000608721 2025 ntBASIC24.08■■□□□ 1.44
CCNYL3P0C7X3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CCNYL3P0C7X3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CCNYL3P0C7X3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.06■■□□□ 1.44
CCNYL3P0C7X3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.06■■□□□ 1.44
CCNYL3P0C7X3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCNYL3P0C7X3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCNYL3P0C7X3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCNYL3P0C7X3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNYL3P0C7X3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.05■■□□□ 1.44
CCNYL3P0C7X3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNYL3P0C7X3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CCNYL3P0C7X3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNYL3P0C7X3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CCNYL3P0C7X3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNYL3P0C7X3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.03■■□□□ 1.44
CCNYL3P0C7X3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNYL3P0C7X3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNYL3P0C7X3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
CCNYL3P0C7X3 MIR219A2-201ENST00000608502 1504 ntBASIC24.03■■□□□ 1.44
CCNYL3P0C7X3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.02■■□□□ 1.44
CCNYL3P0C7X3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNYL3P0C7X3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNYL3P0C7X3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCNYL3P0C7X3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.02■■□□□ 1.44
CCNYL3P0C7X3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNYL3P0C7X3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNYL3P0C7X3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.01■■□□□ 1.43
CCNYL3P0C7X3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNYL3P0C7X3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNYL3P0C7X3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24■■□□□ 1.43
CCNYL3P0C7X3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNYL3P0C7X3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 AC060814.1-201ENST00000554326 538 ntBASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 NTF6A-201ENST00000591175 560 ntBASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNYL3P0C7X3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCNYL3P0C7X3 AC126177.7-201ENST00000547904 679 ntBASIC23.98■■□□□ 1.43
CCNYL3P0C7X3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNYL3P0C7X3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.98■■□□□ 1.43
CCNYL3P0C7X3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCNYL3P0C7X3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.97■■□□□ 1.43
CCNYL3P0C7X3 AC142086.6-201ENST00000621154 1765 ntBASIC23.97■■□□□ 1.43
CCNYL3P0C7X3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.96■■□□□ 1.43
CCNYL3P0C7X3 AP004833.2-201ENST00000532228 1454 ntBASIC23.96■■□□□ 1.43
CCNYL3P0C7X3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCNYL3P0C7X3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCNYL3P0C7X3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
CCNYL3P0C7X3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCNYL3P0C7X3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CCNYL3P0C7X3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCNYL3P0C7X3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCNYL3P0C7X3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 257.5 ms