Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFNA1P01562 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.87■□□□□ 0.77
IFNA1P01562 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.87■□□□□ 0.77
IFNA1P01562 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.87■□□□□ 0.77
IFNA1P01562 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFNA1P01562 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IFNA1P01562 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.86■□□□□ 0.77
IFNA1P01562 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.86■□□□□ 0.77
IFNA1P01562 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.85■□□□□ 0.77
IFNA1P01562 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFNA1P01562 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFNA1P01562 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IFNA1P01562 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFNA1P01562 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
IFNA1P01562 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFNA1P01562 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFNA1P01562 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
IFNA1P01562 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.84■□□□□ 0.77
IFNA1P01562 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.84■□□□□ 0.77
IFNA1P01562 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
IFNA1P01562 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IFNA1P01562 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
IFNA1P01562 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.83■□□□□ 0.76
IFNA1P01562 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
IFNA1P01562 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
IFNA1P01562 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
IFNA1P01562 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IFNA1P01562 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.82■□□□□ 0.76
IFNA1P01562 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.82■□□□□ 0.76
IFNA1P01562 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IFNA1P01562 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
IFNA1P01562 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.81■□□□□ 0.76
IFNA1P01562 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
IFNA1P01562 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
IFNA1P01562 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNA1P01562 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNA1P01562 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IFNA1P01562 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNA1P01562 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IFNA1P01562 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
IFNA1P01562 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IFNA1P01562 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.79■□□□□ 0.76
IFNA1P01562 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IFNA1P01562 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.79■□□□□ 0.76
IFNA1P01562 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
IFNA1P01562 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
IFNA1P01562 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFNA1P01562 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IFNA1P01562 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.78■□□□□ 0.76
IFNA1P01562 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IFNA1P01562 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFNA1P01562 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFNA1P01562 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
IFNA1P01562 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.77■□□□□ 0.75
IFNA1P01562 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFNA1P01562 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IFNA1P01562 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.76■□□□□ 0.75
IFNA1P01562 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IFNA1P01562 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IFNA1P01562 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IFNA1P01562 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.75■□□□□ 0.75
IFNA1P01562 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IFNA1P01562 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
IFNA1P01562 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFNA1P01562 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
IFNA1P01562 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.75■□□□□ 0.75
IFNA1P01562 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.74■□□□□ 0.75
IFNA1P01562 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IFNA1P01562 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.73■□□□□ 0.75
IFNA1P01562 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IFNA1P01562 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFNA1P01562 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IFNA1P01562 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFNA1P01562 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IFNA1P01562 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
IFNA1P01562 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IFNA1P01562 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.71■□□□□ 0.75
IFNA1P01562 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IFNA1P01562 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.71■□□□□ 0.75
IFNA1P01562 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IFNA1P01562 WASH5P-204ENST00000632292 975 ntBASIC19.7■□□□□ 0.74
IFNA1P01562 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFNA1P01562 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IFNA1P01562 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFNA1P01562 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IFNA1P01562 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms