Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.47■■■□□ 2.31
ALDH1A1P00352 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
ALDH1A1P00352 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ALDH1A1P00352 BHLHE23-202ENST00000612929 1109 ntBASIC29.46■■■□□ 2.31
ALDH1A1P00352 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ALDH1A1P00352 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ALDH1A1P00352 SMPD5-203ENST00000639008 1464 ntBASIC29.44■■■□□ 2.3
ALDH1A1P00352 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.44■■■□□ 2.3
ALDH1A1P00352 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
ALDH1A1P00352 AC131212.1-201ENST00000613771 668 ntBASIC29.44■■■□□ 2.3
ALDH1A1P00352 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ALDH1A1P00352 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
ALDH1A1P00352 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 RP9P-202ENST00000450133 1212 ntBASIC29.43■■■□□ 2.3
ALDH1A1P00352 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.43■■■□□ 2.3
ALDH1A1P00352 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.42■■■□□ 2.3
ALDH1A1P00352 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 AC009299.2-201ENST00000482477 511 ntBASIC29.42■■■□□ 2.3
ALDH1A1P00352 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ALDH1A1P00352 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ALDH1A1P00352 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ALDH1A1P00352 AC026202.3-201ENST00000600805 1127 ntBASIC29.41■■■□□ 2.3
ALDH1A1P00352 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.41■■■□□ 2.3
ALDH1A1P00352 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.41■■■□□ 2.3
ALDH1A1P00352 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ALDH1A1P00352 HES6-204ENST00000409182 863 ntTSL 2 BASIC29.4■■■□□ 2.3
ALDH1A1P00352 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
ALDH1A1P00352 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ALDH1A1P00352 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.4■■■□□ 2.3
ALDH1A1P00352 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.39■■■□□ 2.3
ALDH1A1P00352 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ALDH1A1P00352 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
ALDH1A1P00352 AC010980.1-201ENST00000587192 1142 ntBASIC29.38■■■□□ 2.29
ALDH1A1P00352 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
ALDH1A1P00352 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ALDH1A1P00352 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
ALDH1A1P00352 DUX4L9-201ENST00000449051 1259 ntBASIC29.37■■■□□ 2.29
ALDH1A1P00352 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.37■■■□□ 2.29
ALDH1A1P00352 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.37■■■□□ 2.29
ALDH1A1P00352 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
ALDH1A1P00352 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ALDH1A1P00352 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
ALDH1A1P00352 YBX1P4-201ENST00000392794 808 ntBASIC29.35■■■□□ 2.29
ALDH1A1P00352 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.35■■■□□ 2.29
ALDH1A1P00352 KRT8P33-201ENST00000508125 1423 ntBASIC29.35■■■□□ 2.29
ALDH1A1P00352 THA1P-201ENST00000590384 1145 ntBASIC29.34■■■□□ 2.29
ALDH1A1P00352 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
ALDH1A1P00352 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ALDH1A1P00352 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ALDH1A1P00352 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ALDH1A1P00352 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.32■■■□□ 2.28
ALDH1A1P00352 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.32■■■□□ 2.28
ALDH1A1P00352 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.31■■■□□ 2.28
ALDH1A1P00352 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.3■■■□□ 2.28
ALDH1A1P00352 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 GUSBP5-201ENST00000418136 578 ntBASIC29.3■■■□□ 2.28
ALDH1A1P00352 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.29■■■□□ 2.28
ALDH1A1P00352 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 AC139795.1-202ENST00000500444 432 ntBASIC29.29■■■□□ 2.28
ALDH1A1P00352 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ALDH1A1P00352 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ALDH1A1P00352 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ALDH1A1P00352 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.28■■■□□ 2.28
ALDH1A1P00352 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
ALDH1A1P00352 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.27■■■□□ 2.28
ALDH1A1P00352 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ALDH1A1P00352 OR2A1-AS1-204ENST00000470435 602 ntBASIC29.26■■■□□ 2.27
ALDH1A1P00352 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
ALDH1A1P00352 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ALDH1A1P00352 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ALDH1A1P00352 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.25■■■□□ 2.27
ALDH1A1P00352 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.25■■■□□ 2.27
ALDH1A1P00352 AC025884.2-201ENST00000553429 711 ntBASIC29.25■■■□□ 2.27
ALDH1A1P00352 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ALDH1A1P00352 AC103834.1-201ENST00000520383 144 ntBASIC29.24■■■□□ 2.27
ALDH1A1P00352 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
ALDH1A1P00352 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
ALDH1A1P00352 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.22■■■□□ 2.27
ALDH1A1P00352 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.22■■■□□ 2.27
ALDH1A1P00352 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms