Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.73■■□□□ 1.71
TTC4O95801 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC4O95801 AC091060.1-201ENST00000623524 1766 ntBASIC25.72■■□□□ 1.71
TTC4O95801 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
TTC4O95801 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.71■■□□□ 1.71
TTC4O95801 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC4O95801 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
TTC4O95801 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
TTC4O95801 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.7■■□□□ 1.71
TTC4O95801 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
TTC4O95801 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.7■■□□□ 1.7
TTC4O95801 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TTC4O95801 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.7■■□□□ 1.7
TTC4O95801 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.69■■□□□ 1.7
TTC4O95801 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TTC4O95801 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.69■■□□□ 1.7
TTC4O95801 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TTC4O95801 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TTC4O95801 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
TTC4O95801 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TTC4O95801 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TTC4O95801 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TTC4O95801 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.67■■□□□ 1.7
TTC4O95801 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
TTC4O95801 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC4O95801 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.66■■□□□ 1.7
TTC4O95801 AC018358.1-201ENST00000631079 1402 ntBASIC25.66■■□□□ 1.7
TTC4O95801 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.66■■□□□ 1.7
TTC4O95801 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC4O95801 AC135983.2-203ENST00000454486 1613 ntBASIC25.66■■□□□ 1.7
TTC4O95801 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.66■■□□□ 1.7
TTC4O95801 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
TTC4O95801 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
TTC4O95801 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC4O95801 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC4O95801 DUX4L28-201ENST00000623687 678 ntBASIC25.65■■□□□ 1.7
TTC4O95801 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC4O95801 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC4O95801 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC4O95801 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC4O95801 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.64■■□□□ 1.7
TTC4O95801 MIR3665-201ENST00000578708 105 ntBASIC25.64■■□□□ 1.7
TTC4O95801 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC4O95801 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TTC4O95801 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TTC4O95801 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.63■■□□□ 1.69
TTC4O95801 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
TTC4O95801 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
TTC4O95801 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TTC4O95801 MIR6090-201ENST00000622481 60 ntBASIC25.63■■□□□ 1.69
TTC4O95801 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TTC4O95801 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.63■■□□□ 1.69
TTC4O95801 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC4O95801 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC4O95801 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC4O95801 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
TTC4O95801 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.61■■□□□ 1.69
TTC4O95801 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC4O95801 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC4O95801 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
TTC4O95801 AP006261.1-201ENST00000584783 668 ntBASIC25.59■■□□□ 1.69
TTC4O95801 LINC00273-201ENST00000539813 1452 ntBASIC25.59■■□□□ 1.69
TTC4O95801 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC4O95801 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC4O95801 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TTC4O95801 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC4O95801 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
TTC4O95801 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.58■■□□□ 1.68
TTC4O95801 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC4O95801 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TTC4O95801 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.56■■□□□ 1.68
TTC4O95801 WHAMMP2-203ENST00000563942 1603 ntBASIC25.56■■□□□ 1.68
TTC4O95801 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC4O95801 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC4O95801 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC4O95801 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.56■■□□□ 1.68
TTC4O95801 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.56■■□□□ 1.68
TTC4O95801 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC4O95801 AC145676.1-201ENST00000514988 2004 ntBASIC25.56■■□□□ 1.68
TTC4O95801 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC4O95801 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
TTC4O95801 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TTC4O95801 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TTC4O95801 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC4O95801 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.54■■□□□ 1.68
TTC4O95801 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.54■■□□□ 1.68
TTC4O95801 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TTC4O95801 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC4O95801 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.54■■□□□ 1.68
TTC4O95801 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC4O95801 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.53■■□□□ 1.68
TTC4O95801 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC4O95801 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC4O95801 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC4O95801 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
TTC4O95801 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC4O95801 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.5■■□□□ 1.67
TTC4O95801 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TTC4O95801 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.5■■□□□ 1.67
TTC4O95801 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms