Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN9O75954 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN9O75954 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.22■□□□□ 0.99
TSPAN9O75954 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TSPAN9O75954 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN9O75954 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN9O75954 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN9O75954 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN9O75954 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TSPAN9O75954 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.21■□□□□ 0.99
TSPAN9O75954 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.21■□□□□ 0.99
TSPAN9O75954 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN9O75954 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN9O75954 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN9O75954 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN9O75954 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.19■□□□□ 0.98
TSPAN9O75954 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN9O75954 AC108673.1-201ENST00000510422 1159 ntBASIC21.19■□□□□ 0.98
TSPAN9O75954 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN9O75954 HLA-V-202ENST00000446817 847 ntBASIC21.18■□□□□ 0.98
TSPAN9O75954 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN9O75954 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TSPAN9O75954 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN9O75954 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN9O75954 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN9O75954 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.17■□□□□ 0.98
TSPAN9O75954 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN9O75954 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN9O75954 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.17■□□□□ 0.98
TSPAN9O75954 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN9O75954 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN9O75954 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN9O75954 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TSPAN9O75954 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN9O75954 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.16■□□□□ 0.98
TSPAN9O75954 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN9O75954 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN9O75954 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN9O75954 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN9O75954 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN9O75954 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN9O75954 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN9O75954 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.14■□□□□ 0.97
TSPAN9O75954 AC021231.2-201ENST00000594613 730 ntBASIC21.14■□□□□ 0.97
TSPAN9O75954 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN9O75954 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN9O75954 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN9O75954 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN9O75954 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN9O75954 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN9O75954 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN9O75954 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TSPAN9O75954 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.12■□□□□ 0.97
TSPAN9O75954 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN9O75954 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TSPAN9O75954 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN9O75954 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN9O75954 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN9O75954 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TSPAN9O75954 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TSPAN9O75954 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.11■□□□□ 0.97
TSPAN9O75954 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TSPAN9O75954 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN9O75954 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN9O75954 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN9O75954 MIR6090-201ENST00000622481 60 ntBASIC21.11■□□□□ 0.97
TSPAN9O75954 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN9O75954 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN9O75954 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.1■□□□□ 0.97
TSPAN9O75954 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN9O75954 LINC00543-201ENST00000567234 1845 ntBASIC21.09■□□□□ 0.97
TSPAN9O75954 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN9O75954 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TSPAN9O75954 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN9O75954 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN9O75954 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN9O75954 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN9O75954 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TSPAN9O75954 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TSPAN9O75954 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TSPAN9O75954 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TSPAN9O75954 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.07■□□□□ 0.96
TSPAN9O75954 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TSPAN9O75954 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN9O75954 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
TSPAN9O75954 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN9O75954 AC093323.1-202ENST00000635031 2045 ntBASIC21.06■□□□□ 0.96
TSPAN9O75954 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN9O75954 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN9O75954 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TSPAN9O75954 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN9O75954 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN9O75954 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.05■□□□□ 0.96
TSPAN9O75954 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.05■□□□□ 0.96
TSPAN9O75954 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TSPAN9O75954 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN9O75954 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN9O75954 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TSPAN9O75954 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN9O75954 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms