Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDCD6O75340 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PDCD6O75340 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDCD6O75340 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.19■□□□□ 0.98
PDCD6O75340 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.19■□□□□ 0.98
PDCD6O75340 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDCD6O75340 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDCD6O75340 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDCD6O75340 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD6O75340 AP006261.1-201ENST00000584783 668 ntBASIC21.18■□□□□ 0.98
PDCD6O75340 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD6O75340 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDCD6O75340 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD6O75340 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.17■□□□□ 0.98
PDCD6O75340 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.17■□□□□ 0.98
PDCD6O75340 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD6O75340 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD6O75340 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDCD6O75340 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDCD6O75340 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDCD6O75340 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDCD6O75340 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.16■□□□□ 0.98
PDCD6O75340 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PDCD6O75340 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.16■□□□□ 0.98
PDCD6O75340 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.16■□□□□ 0.98
PDCD6O75340 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDCD6O75340 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDCD6O75340 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDCD6O75340 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.16■□□□□ 0.98
PDCD6O75340 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDCD6O75340 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDCD6O75340 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PDCD6O75340 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.15■□□□□ 0.98
PDCD6O75340 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.15■□□□□ 0.98
PDCD6O75340 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.15■□□□□ 0.98
PDCD6O75340 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.15■□□□□ 0.98
PDCD6O75340 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.15■□□□□ 0.98
PDCD6O75340 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDCD6O75340 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDCD6O75340 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDCD6O75340 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.14■□□□□ 0.97
PDCD6O75340 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDCD6O75340 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.13■□□□□ 0.97
PDCD6O75340 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDCD6O75340 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDCD6O75340 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDCD6O75340 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDCD6O75340 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDCD6O75340 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDCD6O75340 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.12■□□□□ 0.97
PDCD6O75340 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDCD6O75340 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDCD6O75340 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDCD6O75340 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDCD6O75340 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.11■□□□□ 0.97
PDCD6O75340 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PDCD6O75340 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDCD6O75340 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDCD6O75340 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDCD6O75340 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDCD6O75340 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDCD6O75340 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDCD6O75340 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDCD6O75340 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDCD6O75340 AC087741.3-201ENST00000624270 1347 ntBASIC21.08■□□□□ 0.97
PDCD6O75340 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.08■□□□□ 0.97
PDCD6O75340 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PDCD6O75340 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.08■□□□□ 0.97
PDCD6O75340 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PDCD6O75340 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDCD6O75340 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDCD6O75340 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
PDCD6O75340 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.07■□□□□ 0.96
PDCD6O75340 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD6O75340 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDCD6O75340 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.06■□□□□ 0.96
PDCD6O75340 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.06■□□□□ 0.96
PDCD6O75340 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.05■□□□□ 0.96
PDCD6O75340 AC091060.1-201ENST00000623524 1766 ntBASIC21.05■□□□□ 0.96
PDCD6O75340 AL449106.1-201ENST00000608517 1980 ntBASIC21.05■□□□□ 0.96
PDCD6O75340 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.04■□□□□ 0.96
PDCD6O75340 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PDCD6O75340 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.04■□□□□ 0.96
PDCD6O75340 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDCD6O75340 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.04■□□□□ 0.96
PDCD6O75340 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD6O75340 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.03■□□□□ 0.96
PDCD6O75340 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.03■□□□□ 0.96
PDCD6O75340 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD6O75340 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDCD6O75340 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.02■□□□□ 0.96
PDCD6O75340 AC044849.2-201ENST00000606596 710 ntBASIC21.02■□□□□ 0.96
PDCD6O75340 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDCD6O75340 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PDCD6O75340 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDCD6O75340 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PDCD6O75340 AC110285.7-201ENST00000624417 1536 ntBASIC21.01■□□□□ 0.95
PDCD6O75340 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDCD6O75340 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.01■□□□□ 0.95
PDCD6O75340 AL162393.1-201ENST00000437852 946 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms