Protein–RNA interactions for Protein: O43678

NDUFA2, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA2O43678 DUX4L25-201ENST00000624915 1269 ntBASIC21.42■■□□□ 1.02
NDUFA2O43678 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NDUFA2O43678 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
NDUFA2O43678 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.41■■□□□ 1.02
NDUFA2O43678 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.41■■□□□ 1.02
NDUFA2O43678 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.41■■□□□ 1.02
NDUFA2O43678 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.41■■□□□ 1.02
NDUFA2O43678 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.41■■□□□ 1.02
NDUFA2O43678 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NDUFA2O43678 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
NDUFA2O43678 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NDUFA2O43678 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NDUFA2O43678 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NDUFA2O43678 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NDUFA2O43678 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.39■■□□□ 1.01
NDUFA2O43678 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NDUFA2O43678 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NDUFA2O43678 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NDUFA2O43678 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.38■■□□□ 1.01
NDUFA2O43678 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.38■■□□□ 1.01
NDUFA2O43678 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.38■■□□□ 1.01
NDUFA2O43678 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NDUFA2O43678 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NDUFA2O43678 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.37■■□□□ 1.01
NDUFA2O43678 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NDUFA2O43678 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NDUFA2O43678 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NDUFA2O43678 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFA2O43678 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFA2O43678 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NDUFA2O43678 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NDUFA2O43678 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
NDUFA2O43678 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
NDUFA2O43678 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NDUFA2O43678 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NDUFA2O43678 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
NDUFA2O43678 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NDUFA2O43678 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NDUFA2O43678 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NDUFA2O43678 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFA2O43678 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.34■■□□□ 1.01
NDUFA2O43678 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.34■■□□□ 1.01
NDUFA2O43678 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFA2O43678 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFA2O43678 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.34■■□□□ 1.01
NDUFA2O43678 MIR3648-2-201ENST00000581792 180 ntBASIC21.34■■□□□ 1.01
NDUFA2O43678 MIR3648-1-201ENST00000615959 180 ntBASIC21.34■■□□□ 1.01
NDUFA2O43678 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.33■■□□□ 1.01
NDUFA2O43678 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.33■■□□□ 1
NDUFA2O43678 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.32■■□□□ 1
NDUFA2O43678 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFA2O43678 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.32■■□□□ 1
NDUFA2O43678 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.32■■□□□ 1
NDUFA2O43678 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.32■■□□□ 1
NDUFA2O43678 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.32■■□□□ 1
NDUFA2O43678 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.32■■□□□ 1
NDUFA2O43678 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.32■■□□□ 1
NDUFA2O43678 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFA2O43678 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.31■■□□□ 1
NDUFA2O43678 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFA2O43678 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.31■■□□□ 1
NDUFA2O43678 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFA2O43678 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFA2O43678 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.31■■□□□ 1
NDUFA2O43678 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.31■■□□□ 1
NDUFA2O43678 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.3■■□□□ 1
NDUFA2O43678 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.3■■□□□ 1
NDUFA2O43678 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFA2O43678 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
NDUFA2O43678 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFA2O43678 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFA2O43678 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFA2O43678 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFA2O43678 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFA2O43678 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.29■■□□□ 1
NDUFA2O43678 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.29■■□□□ 1
NDUFA2O43678 CR559946.2-201ENST00000623684 991 ntBASIC21.29■■□□□ 1
NDUFA2O43678 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFA2O43678 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFA2O43678 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NDUFA2O43678 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NDUFA2O43678 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFA2O43678 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.27■■□□□ 1
NDUFA2O43678 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.27■■□□□ 1
NDUFA2O43678 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.27■■□□□ 1
NDUFA2O43678 AC110285.7-201ENST00000624417 1536 ntBASIC21.27■■□□□ 1
NDUFA2O43678 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.27■■□□□ 1
NDUFA2O43678 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NDUFA2O43678 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.26■□□□□ 0.99
NDUFA2O43678 AC016575.1-201ENST00000607026 382 ntBASIC21.26■□□□□ 0.99
NDUFA2O43678 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFA2O43678 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.26■□□□□ 0.99
NDUFA2O43678 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.26■□□□□ 0.99
NDUFA2O43678 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFA2O43678 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFA2O43678 AC100797.4-201ENST00000631653 1827 ntBASIC21.25■□□□□ 0.99
NDUFA2O43678 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NDUFA2O43678 AC008813.1-201ENST00000536597 885 ntBASIC21.25■□□□□ 0.99
NDUFA2O43678 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFA2O43678 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms