Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNAI2O43623 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.57■□□□□ 0.56
SNAI2O43623 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.57■□□□□ 0.56
SNAI2O43623 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI2O43623 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.57■□□□□ 0.56
SNAI2O43623 AL449106.1-201ENST00000608517 1980 ntBASIC18.57■□□□□ 0.56
SNAI2O43623 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.56■□□□□ 0.56
SNAI2O43623 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNAI2O43623 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.56■□□□□ 0.56
SNAI2O43623 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SNAI2O43623 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.56■□□□□ 0.56
SNAI2O43623 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNAI2O43623 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI2O43623 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI2O43623 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNAI2O43623 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI2O43623 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNAI2O43623 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI2O43623 SETD8P1-201ENST00000623146 1180 ntBASIC18.54■□□□□ 0.56
SNAI2O43623 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI2O43623 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI2O43623 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI2O43623 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI2O43623 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI2O43623 RARRES2P7-201ENST00000567349 469 ntBASIC18.52■□□□□ 0.56
SNAI2O43623 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SNAI2O43623 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAI2O43623 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI2O43623 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI2O43623 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI2O43623 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI2O43623 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI2O43623 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.51■□□□□ 0.55
SNAI2O43623 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.51■□□□□ 0.55
SNAI2O43623 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.51■□□□□ 0.55
SNAI2O43623 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI2O43623 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAI2O43623 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI2O43623 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI2O43623 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI2O43623 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SNAI2O43623 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI2O43623 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI2O43623 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI2O43623 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAI2O43623 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI2O43623 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI2O43623 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI2O43623 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI2O43623 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SNAI2O43623 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI2O43623 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNAI2O43623 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNAI2O43623 AL391121.1-201ENST00000607967 1349 ntBASIC18.48■□□□□ 0.55
SNAI2O43623 AC091060.1-201ENST00000623524 1766 ntBASIC18.47■□□□□ 0.55
SNAI2O43623 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI2O43623 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI2O43623 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI2O43623 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI2O43623 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNAI2O43623 AC018358.1-201ENST00000631079 1402 ntBASIC18.47■□□□□ 0.55
SNAI2O43623 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SNAI2O43623 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI2O43623 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI2O43623 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNAI2O43623 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAI2O43623 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.46■□□□□ 0.55
SNAI2O43623 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.46■□□□□ 0.55
SNAI2O43623 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAI2O43623 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAI2O43623 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SNAI2O43623 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.45■□□□□ 0.54
SNAI2O43623 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAI2O43623 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAI2O43623 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAI2O43623 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SNAI2O43623 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.45■□□□□ 0.54
SNAI2O43623 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNAI2O43623 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAI2O43623 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.44■□□□□ 0.54
SNAI2O43623 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNAI2O43623 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNAI2O43623 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.43■□□□□ 0.54
SNAI2O43623 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNAI2O43623 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.43■□□□□ 0.54
SNAI2O43623 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNAI2O43623 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.43■□□□□ 0.54
SNAI2O43623 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNAI2O43623 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SNAI2O43623 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SNAI2O43623 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNAI2O43623 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.42■□□□□ 0.54
SNAI2O43623 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNAI2O43623 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNAI2O43623 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNAI2O43623 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNAI2O43623 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.41■□□□□ 0.54
SNAI2O43623 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SNAI2O43623 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNAI2O43623 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms