Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
XRCC2O43543 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
XRCC2O43543 LINC01971-201ENST00000617888 1048 ntBASIC21.77■■□□□ 1.08
XRCC2O43543 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
XRCC2O43543 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
XRCC2O43543 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
XRCC2O43543 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
XRCC2O43543 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.76■■□□□ 1.07
XRCC2O43543 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
XRCC2O43543 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.76■■□□□ 1.07
XRCC2O43543 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.76■■□□□ 1.07
XRCC2O43543 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.75■■□□□ 1.07
XRCC2O43543 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
XRCC2O43543 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
XRCC2O43543 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
XRCC2O43543 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.74■■□□□ 1.07
XRCC2O43543 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
XRCC2O43543 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
XRCC2O43543 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
XRCC2O43543 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
XRCC2O43543 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.74■■□□□ 1.07
XRCC2O43543 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
XRCC2O43543 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
XRCC2O43543 AL121749.1-202ENST00000609313 2153 ntBASIC21.73■■□□□ 1.07
XRCC2O43543 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.72■■□□□ 1.07
XRCC2O43543 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
XRCC2O43543 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
XRCC2O43543 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
XRCC2O43543 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.72■■□□□ 1.07
XRCC2O43543 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
XRCC2O43543 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
XRCC2O43543 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
XRCC2O43543 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.7■■□□□ 1.06
XRCC2O43543 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.7■■□□□ 1.06
XRCC2O43543 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.7■■□□□ 1.06
XRCC2O43543 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
XRCC2O43543 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
XRCC2O43543 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
XRCC2O43543 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
XRCC2O43543 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
XRCC2O43543 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
XRCC2O43543 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
XRCC2O43543 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
XRCC2O43543 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
XRCC2O43543 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
XRCC2O43543 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
XRCC2O43543 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRCC2O43543 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.68■■□□□ 1.06
XRCC2O43543 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRCC2O43543 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.68■■□□□ 1.06
XRCC2O43543 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRCC2O43543 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRCC2O43543 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
XRCC2O43543 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
XRCC2O43543 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRCC2O43543 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.67■■□□□ 1.06
XRCC2O43543 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
XRCC2O43543 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRCC2O43543 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
XRCC2O43543 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
XRCC2O43543 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L13-201ENST00000554103 1267 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L15-201ENST00000611059 1267 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L23-201ENST00000615195 1269 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L24-201ENST00000617576 1269 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L22-201ENST00000618238 1269 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L20-201ENST00000619712 1269 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L21-201ENST00000622058 1269 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L10-201ENST00000622460 1267 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 DUX4L25-201ENST00000624915 1269 ntBASIC21.66■■□□□ 1.06
XRCC2O43543 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.65■■□□□ 1.06
XRCC2O43543 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
XRCC2O43543 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
XRCC2O43543 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.64■■□□□ 1.06
XRCC2O43543 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.64■■□□□ 1.06
XRCC2O43543 ZNRF2P2-203ENST00000454624 420 ntBASIC21.64■■□□□ 1.05
XRCC2O43543 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.64■■□□□ 1.05
XRCC2O43543 DUX4L11-201ENST00000611504 1267 ntBASIC21.64■■□□□ 1.05
XRCC2O43543 DUX4L12-201ENST00000614593 1267 ntBASIC21.64■■□□□ 1.05
XRCC2O43543 DUX4L14-201ENST00000621227 1267 ntBASIC21.64■■□□□ 1.05
XRCC2O43543 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
XRCC2O43543 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRCC2O43543 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRCC2O43543 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
XRCC2O43543 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRCC2O43543 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRCC2O43543 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
XRCC2O43543 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRCC2O43543 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRCC2O43543 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
XRCC2O43543 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRCC2O43543 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRCC2O43543 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRCC2O43543 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XRCC2O43543 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRCC2O43543 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRCC2O43543 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XRCC2O43543 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRCC2O43543 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
XRCC2O43543 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms