Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
SEMA3EO15041 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SEMA3EO15041 ABHD17AP5-201ENST00000580133 923 ntBASIC30.71■■■□□ 2.51
SEMA3EO15041 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SEMA3EO15041 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SEMA3EO15041 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SEMA3EO15041 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.69■■■□□ 2.5
SEMA3EO15041 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SEMA3EO15041 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.69■■■□□ 2.5
SEMA3EO15041 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.68■■■□□ 2.5
SEMA3EO15041 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SEMA3EO15041 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SEMA3EO15041 AC126177.7-201ENST00000547904 679 ntBASIC30.67■■■□□ 2.5
SEMA3EO15041 AP002414.2-202ENST00000590929 1450 ntBASIC30.66■■■□□ 2.5
SEMA3EO15041 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SEMA3EO15041 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.65■■■□□ 2.5
SEMA3EO15041 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SEMA3EO15041 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.64■■■□□ 2.5
SEMA3EO15041 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.64■■■□□ 2.5
SEMA3EO15041 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.64■■■□□ 2.5
SEMA3EO15041 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SEMA3EO15041 AC092296.2-201ENST00000589470 999 ntBASIC30.64■■■□□ 2.5
SEMA3EO15041 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.64■■■□□ 2.5
SEMA3EO15041 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SEMA3EO15041 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.64■■■□□ 2.5
SEMA3EO15041 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.64■■■□□ 2.5
SEMA3EO15041 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.64■■■□□ 2.5
SEMA3EO15041 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SEMA3EO15041 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.49
SEMA3EO15041 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
SEMA3EO15041 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SEMA3EO15041 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.62■■■□□ 2.49
SEMA3EO15041 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.62■■■□□ 2.49
SEMA3EO15041 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SEMA3EO15041 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.61■■■□□ 2.49
SEMA3EO15041 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
SEMA3EO15041 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SEMA3EO15041 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SEMA3EO15041 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SEMA3EO15041 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SEMA3EO15041 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SEMA3EO15041 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SEMA3EO15041 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SEMA3EO15041 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
SEMA3EO15041 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SEMA3EO15041 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SEMA3EO15041 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SEMA3EO15041 ECEL1P2-201ENST00000461596 1295 ntBASIC30.55■■■□□ 2.48
SEMA3EO15041 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
SEMA3EO15041 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.55■■■□□ 2.48
SEMA3EO15041 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
SEMA3EO15041 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SEMA3EO15041 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SEMA3EO15041 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SEMA3EO15041 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SEMA3EO15041 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.53■■■□□ 2.48
SEMA3EO15041 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SEMA3EO15041 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SEMA3EO15041 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.52■■■□□ 2.48
SEMA3EO15041 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SEMA3EO15041 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SEMA3EO15041 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SEMA3EO15041 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SEMA3EO15041 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
SEMA3EO15041 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SEMA3EO15041 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.5■■■□□ 2.47
SEMA3EO15041 AL157400.5-201ENST00000507624 621 ntBASIC30.5■■■□□ 2.47
SEMA3EO15041 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
SEMA3EO15041 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SEMA3EO15041 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SEMA3EO15041 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SEMA3EO15041 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SEMA3EO15041 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SEMA3EO15041 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SEMA3EO15041 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SEMA3EO15041 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.47■■■□□ 2.47
SEMA3EO15041 NTF6A-201ENST00000591175 560 ntBASIC30.47■■■□□ 2.47
SEMA3EO15041 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.47■■■□□ 2.47
SEMA3EO15041 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SEMA3EO15041 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.46■■■□□ 2.47
SEMA3EO15041 AC018358.1-201ENST00000631079 1402 ntBASIC30.46■■■□□ 2.47
SEMA3EO15041 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.45■■■□□ 2.47
SEMA3EO15041 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SEMA3EO15041 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
SEMA3EO15041 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
SEMA3EO15041 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
SEMA3EO15041 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
SEMA3EO15041 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SEMA3EO15041 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
SEMA3EO15041 AL359258.2-201ENST00000564063 1566 ntBASIC30.44■■■□□ 2.46
SEMA3EO15041 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SEMA3EO15041 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
SEMA3EO15041 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
SEMA3EO15041 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SEMA3EO15041 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SEMA3EO15041 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
SEMA3EO15041 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SEMA3EO15041 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.42■■■□□ 2.46
SEMA3EO15041 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.42■■■□□ 2.46
SEMA3EO15041 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms