Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
A0A1W2PRF3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
A0A1W2PRF3 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.63■□□□□ 0.89
A0A1W2PRF3 AC008813.1-201ENST00000536597 885 ntBASIC20.63■□□□□ 0.89
A0A1W2PRF3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.63■□□□□ 0.89
A0A1W2PRF3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.63■□□□□ 0.89
A0A1W2PRF3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
A0A1W2PRF3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
A0A1W2PRF3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
A0A1W2PRF3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.62■□□□□ 0.89
A0A1W2PRF3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.62■□□□□ 0.89
A0A1W2PRF3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
A0A1W2PRF3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
A0A1W2PRF3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
A0A1W2PRF3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
A0A1W2PRF3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
A0A1W2PRF3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
A0A1W2PRF3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
A0A1W2PRF3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
A0A1W2PRF3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
A0A1W2PRF3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
A0A1W2PRF3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
A0A1W2PRF3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
A0A1W2PRF3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.59■□□□□ 0.89
A0A1W2PRF3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
A0A1W2PRF3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
A0A1W2PRF3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
A0A1W2PRF3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
A0A1W2PRF3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.58■□□□□ 0.89
A0A1W2PRF3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
A0A1W2PRF3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
A0A1W2PRF3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
A0A1W2PRF3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
A0A1W2PRF3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
A0A1W2PRF3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
A0A1W2PRF3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.57■□□□□ 0.88
A0A1W2PRF3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
A0A1W2PRF3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
A0A1W2PRF3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.56■□□□□ 0.88
A0A1W2PRF3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
A0A1W2PRF3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
A0A1W2PRF3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
A0A1W2PRF3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
A0A1W2PRF3 MIR219A2-201ENST00000608502 1504 ntBASIC20.55■□□□□ 0.88
A0A1W2PRF3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.55■□□□□ 0.88
A0A1W2PRF3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
A0A1W2PRF3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
A0A1W2PRF3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
A0A1W2PRF3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
A0A1W2PRF3 HSD17B1P1-201ENST00000590052 955 ntBASIC20.54■□□□□ 0.88
A0A1W2PRF3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.54■□□□□ 0.88
A0A1W2PRF3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
A0A1W2PRF3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
A0A1W2PRF3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.53■□□□□ 0.88
A0A1W2PRF3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.53■□□□□ 0.88
A0A1W2PRF3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
A0A1W2PRF3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.53■□□□□ 0.88
A0A1W2PRF3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
A0A1W2PRF3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
A0A1W2PRF3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
A0A1W2PRF3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
A0A1W2PRF3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
A0A1W2PRF3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
A0A1W2PRF3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
A0A1W2PRF3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
A0A1W2PRF3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.52■□□□□ 0.88
A0A1W2PRF3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.52■□□□□ 0.88
A0A1W2PRF3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
A0A1W2PRF3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
A0A1W2PRF3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
A0A1W2PRF3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
A0A1W2PRF3 AP002414.2-202ENST00000590929 1450 ntBASIC20.5■□□□□ 0.87
A0A1W2PRF3 GPX1-201ENST00000419349 1106 ntBASIC20.5■□□□□ 0.87
A0A1W2PRF3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
A0A1W2PRF3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
A0A1W2PRF3 DRD5P2-201ENST00000421395 2012 ntBASIC20.49■□□□□ 0.87
A0A1W2PRF3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
A0A1W2PRF3 AC148477.6-201ENST00000623746 465 ntBASIC20.49■□□□□ 0.87
A0A1W2PRF3 AC022413.1-201ENST00000624602 984 ntBASIC20.49■□□□□ 0.87
A0A1W2PRF3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
A0A1W2PRF3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
A0A1W2PRF3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
A0A1W2PRF3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
A0A1W2PRF3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.48■□□□□ 0.87
A0A1W2PRF3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
A0A1W2PRF3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.47■□□□□ 0.87
A0A1W2PRF3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
A0A1W2PRF3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.46■□□□□ 0.87
A0A1W2PRF3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
A0A1W2PRF3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
A0A1W2PRF3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.45■□□□□ 0.86
A0A1W2PRF3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
A0A1W2PRF3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms