Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IGHV4-28A0A0C4DH34 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.19■□□□□ 0.5
IGHV4-28A0A0C4DH34 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGHV4-28A0A0C4DH34 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.19■□□□□ 0.5
IGHV4-28A0A0C4DH34 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGHV4-28A0A0C4DH34 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IGHV4-28A0A0C4DH34 MIR219A2-201ENST00000608502 1504 ntBASIC18.18■□□□□ 0.5
IGHV4-28A0A0C4DH34 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
IGHV4-28A0A0C4DH34 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IGHV4-28A0A0C4DH34 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGHV4-28A0A0C4DH34 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.18■□□□□ 0.5
IGHV4-28A0A0C4DH34 AC139426.1-201ENST00000568218 2529 ntBASIC18.18■□□□□ 0.5
IGHV4-28A0A0C4DH34 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGHV4-28A0A0C4DH34 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGHV4-28A0A0C4DH34 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
IGHV4-28A0A0C4DH34 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGHV4-28A0A0C4DH34 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGHV4-28A0A0C4DH34 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGHV4-28A0A0C4DH34 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
IGHV4-28A0A0C4DH34 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.15■□□□□ 0.5
IGHV4-28A0A0C4DH34 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.15■□□□□ 0.5
IGHV4-28A0A0C4DH34 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
IGHV4-28A0A0C4DH34 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.15■□□□□ 0.5
IGHV4-28A0A0C4DH34 AP002414.2-202ENST00000590929 1450 ntBASIC18.14■□□□□ 0.5
IGHV4-28A0A0C4DH34 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IGHV4-28A0A0C4DH34 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 GPX1-201ENST00000419349 1106 ntBASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGHV4-28A0A0C4DH34 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGHV4-28A0A0C4DH34 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 AC022413.1-201ENST00000624602 984 ntBASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.11■□□□□ 0.49
IGHV4-28A0A0C4DH34 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGHV4-28A0A0C4DH34 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGHV4-28A0A0C4DH34 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGHV4-28A0A0C4DH34 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.1■□□□□ 0.49
IGHV4-28A0A0C4DH34 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.1■□□□□ 0.49
IGHV4-28A0A0C4DH34 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.1■□□□□ 0.49
IGHV4-28A0A0C4DH34 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.1■□□□□ 0.49
IGHV4-28A0A0C4DH34 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IGHV4-28A0A0C4DH34 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IGHV4-28A0A0C4DH34 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV4-28A0A0C4DH34 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.09■□□□□ 0.49
IGHV4-28A0A0C4DH34 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.09■□□□□ 0.49
IGHV4-28A0A0C4DH34 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV4-28A0A0C4DH34 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV4-28A0A0C4DH34 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.08■□□□□ 0.49
IGHV4-28A0A0C4DH34 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGHV4-28A0A0C4DH34 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.08■□□□□ 0.49
IGHV4-28A0A0C4DH34 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IGHV4-28A0A0C4DH34 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV4-28A0A0C4DH34 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.07■□□□□ 0.48
IGHV4-28A0A0C4DH34 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV4-28A0A0C4DH34 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV4-28A0A0C4DH34 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV4-28A0A0C4DH34 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV4-28A0A0C4DH34 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV4-28A0A0C4DH34 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV4-28A0A0C4DH34 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
IGHV4-28A0A0C4DH34 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV4-28A0A0C4DH34 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV4-28A0A0C4DH34 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV4-28A0A0C4DH34 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGHV4-28A0A0C4DH34 AC126177.7-201ENST00000547904 679 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms