Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-3A0A0B4J271 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAV12-3A0A0B4J271 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAV12-3A0A0B4J271 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV12-3A0A0B4J271 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV12-3A0A0B4J271 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV12-3A0A0B4J271 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV12-3A0A0B4J271 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV12-3A0A0B4J271 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-3A0A0B4J271 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV12-3A0A0B4J271 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV12-3A0A0B4J271 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.56■□□□□ 0.56
TRAV12-3A0A0B4J271 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAV12-3A0A0B4J271 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV12-3A0A0B4J271 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-3A0A0B4J271 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-3A0A0B4J271 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-3A0A0B4J271 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-3A0A0B4J271 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV12-3A0A0B4J271 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-3A0A0B4J271 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-3A0A0B4J271 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-3A0A0B4J271 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV12-3A0A0B4J271 AC018358.1-201ENST00000631079 1402 ntBASIC18.54■□□□□ 0.56
TRAV12-3A0A0B4J271 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-3A0A0B4J271 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-3A0A0B4J271 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-3A0A0B4J271 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-3A0A0B4J271 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-3A0A0B4J271 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-3A0A0B4J271 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-3A0A0B4J271 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-3A0A0B4J271 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV12-3A0A0B4J271 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV12-3A0A0B4J271 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV12-3A0A0B4J271 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV12-3A0A0B4J271 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV12-3A0A0B4J271 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV12-3A0A0B4J271 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV12-3A0A0B4J271 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV12-3A0A0B4J271 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV12-3A0A0B4J271 DUX4L29-201ENST00000425409 679 ntBASIC18.5■□□□□ 0.55
TRAV12-3A0A0B4J271 AC021231.2-201ENST00000594613 730 ntBASIC18.5■□□□□ 0.55
TRAV12-3A0A0B4J271 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV12-3A0A0B4J271 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV12-3A0A0B4J271 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-3A0A0B4J271 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV12-3A0A0B4J271 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-3A0A0B4J271 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-3A0A0B4J271 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV12-3A0A0B4J271 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV12-3A0A0B4J271 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-3A0A0B4J271 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV12-3A0A0B4J271 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-3A0A0B4J271 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 AC110285.7-201ENST00000624417 1536 ntBASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV12-3A0A0B4J271 RPS2P35-201ENST00000443417 897 ntBASIC18.45■□□□□ 0.54
TRAV12-3A0A0B4J271 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRAV12-3A0A0B4J271 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-3A0A0B4J271 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV12-3A0A0B4J271 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-3A0A0B4J271 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV12-3A0A0B4J271 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-3A0A0B4J271 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV12-3A0A0B4J271 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-3A0A0B4J271 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV12-3A0A0B4J271 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV12-3A0A0B4J271 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV12-3A0A0B4J271 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV12-3A0A0B4J271 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV12-3A0A0B4J271 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-3A0A0B4J271 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV12-3A0A0B4J271 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-3A0A0B4J271 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-3A0A0B4J271 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV12-3A0A0B4J271 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV12-3A0A0B4J271 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms