Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-2A0A0B4J237 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.03■□□□□ 0.64
TRAV8-2A0A0B4J237 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV8-2A0A0B4J237 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-2A0A0B4J237 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV8-2A0A0B4J237 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.03■□□□□ 0.64
TRAV8-2A0A0B4J237 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-2A0A0B4J237 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.02■□□□□ 0.64
TRAV8-2A0A0B4J237 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRAV8-2A0A0B4J237 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV8-2A0A0B4J237 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV8-2A0A0B4J237 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-2A0A0B4J237 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV8-2A0A0B4J237 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-2A0A0B4J237 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-2A0A0B4J237 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV8-2A0A0B4J237 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19■□□□□ 0.63
TRAV8-2A0A0B4J237 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV8-2A0A0B4J237 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAV8-2A0A0B4J237 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TRAV8-2A0A0B4J237 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV8-2A0A0B4J237 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV8-2A0A0B4J237 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 AC044849.2-201ENST00000606596 710 ntBASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV8-2A0A0B4J237 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV8-2A0A0B4J237 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV8-2A0A0B4J237 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV8-2A0A0B4J237 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV8-2A0A0B4J237 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV8-2A0A0B4J237 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV8-2A0A0B4J237 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-2A0A0B4J237 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-2A0A0B4J237 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-2A0A0B4J237 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-2A0A0B4J237 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-2A0A0B4J237 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV8-2A0A0B4J237 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV8-2A0A0B4J237 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV8-2A0A0B4J237 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV8-2A0A0B4J237 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRAV8-2A0A0B4J237 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRAV8-2A0A0B4J237 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV8-2A0A0B4J237 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAV8-2A0A0B4J237 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAV8-2A0A0B4J237 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV8-2A0A0B4J237 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV8-2A0A0B4J237 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV8-2A0A0B4J237 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV8-2A0A0B4J237 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV8-2A0A0B4J237 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV8-2A0A0B4J237 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV8-2A0A0B4J237 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-2A0A0B4J237 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-2A0A0B4J237 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV8-2A0A0B4J237 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV8-2A0A0B4J237 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV8-2A0A0B4J237 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV8-2A0A0B4J237 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV8-2A0A0B4J237 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV8-2A0A0B4J237 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV8-2A0A0B4J237 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV8-2A0A0B4J237 AC021231.2-201ENST00000594613 730 ntBASIC18.9■□□□□ 0.62
TRAV8-2A0A0B4J237 AC110285.7-201ENST00000624417 1536 ntBASIC18.9■□□□□ 0.62
TRAV8-2A0A0B4J237 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV8-2A0A0B4J237 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAV8-2A0A0B4J237 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV8-2A0A0B4J237 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV8-2A0A0B4J237 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-2A0A0B4J237 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-2A0A0B4J237 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-2A0A0B4J237 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV8-2A0A0B4J237 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV8-2A0A0B4J237 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRAV8-2A0A0B4J237 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV8-2A0A0B4J237 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAV8-2A0A0B4J237 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV8-2A0A0B4J237 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV8-2A0A0B4J237 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV8-2A0A0B4J237 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms