Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV2A0A0B4J234 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV2A0A0B4J234 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV2A0A0B4J234 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV2A0A0B4J234 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRAV2A0A0B4J234 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV2A0A0B4J234 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV2A0A0B4J234 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRAV2A0A0B4J234 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV2A0A0B4J234 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 MIR7108-201ENST00000614319 87 ntBASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 BX255925.1-201ENST00000566954 1854 ntBASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV2A0A0B4J234 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.89■□□□□ 0.62
TRAV2A0A0B4J234 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAV2A0A0B4J234 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAV2A0A0B4J234 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV2A0A0B4J234 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV2A0A0B4J234 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRAV2A0A0B4J234 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRAV2A0A0B4J234 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV2A0A0B4J234 MIR3648-2-201ENST00000581792 180 ntBASIC18.88■□□□□ 0.61
TRAV2A0A0B4J234 MIR3648-1-201ENST00000615959 180 ntBASIC18.88■□□□□ 0.61
TRAV2A0A0B4J234 CR559946.2-201ENST00000623684 991 ntBASIC18.88■□□□□ 0.61
TRAV2A0A0B4J234 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV2A0A0B4J234 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV2A0A0B4J234 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV2A0A0B4J234 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV2A0A0B4J234 LINC01003-201ENST00000564834 1764 ntBASIC18.87■□□□□ 0.61
TRAV2A0A0B4J234 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.87■□□□□ 0.61
TRAV2A0A0B4J234 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV2A0A0B4J234 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV2A0A0B4J234 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRAV2A0A0B4J234 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV2A0A0B4J234 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV2A0A0B4J234 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV2A0A0B4J234 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV2A0A0B4J234 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV2A0A0B4J234 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV2A0A0B4J234 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV2A0A0B4J234 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV2A0A0B4J234 AC148477.6-201ENST00000623746 465 ntBASIC18.83■□□□□ 0.6
TRAV2A0A0B4J234 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV2A0A0B4J234 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV2A0A0B4J234 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV2A0A0B4J234 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV2A0A0B4J234 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAV2A0A0B4J234 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV2A0A0B4J234 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV2A0A0B4J234 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV2A0A0B4J234 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV2A0A0B4J234 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV2A0A0B4J234 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV2A0A0B4J234 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV2A0A0B4J234 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV2A0A0B4J234 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV2A0A0B4J234 AC016575.1-201ENST00000607026 382 ntBASIC18.79■□□□□ 0.6
TRAV2A0A0B4J234 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV2A0A0B4J234 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV2A0A0B4J234 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV2A0A0B4J234 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV2A0A0B4J234 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRAV2A0A0B4J234 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV2A0A0B4J234 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV2A0A0B4J234 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
TRAV2A0A0B4J234 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRAV2A0A0B4J234 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV2A0A0B4J234 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV2A0A0B4J234 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV2A0A0B4J234 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV2A0A0B4J234 MIR639-201ENST00000384974 98 ntBASIC18.75■□□□□ 0.59
TRAV2A0A0B4J234 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms