Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV30A0A087WSZ9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAV30A0A087WSZ9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV30A0A087WSZ9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV30A0A087WSZ9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV30A0A087WSZ9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV30A0A087WSZ9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV30A0A087WSZ9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV30A0A087WSZ9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV30A0A087WSZ9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV30A0A087WSZ9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV30A0A087WSZ9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRAV30A0A087WSZ9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRAV30A0A087WSZ9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TRAV30A0A087WSZ9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV30A0A087WSZ9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAV30A0A087WSZ9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV30A0A087WSZ9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV30A0A087WSZ9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV30A0A087WSZ9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV30A0A087WSZ9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRAV30A0A087WSZ9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV30A0A087WSZ9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV30A0A087WSZ9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV30A0A087WSZ9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV30A0A087WSZ9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV30A0A087WSZ9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV30A0A087WSZ9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV30A0A087WSZ9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV30A0A087WSZ9 AL162393.1-201ENST00000437852 946 ntBASIC19.55■□□□□ 0.72
TRAV30A0A087WSZ9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAV30A0A087WSZ9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV30A0A087WSZ9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV30A0A087WSZ9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV30A0A087WSZ9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV30A0A087WSZ9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV30A0A087WSZ9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV30A0A087WSZ9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV30A0A087WSZ9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV30A0A087WSZ9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV30A0A087WSZ9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV30A0A087WSZ9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.52■□□□□ 0.72
TRAV30A0A087WSZ9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV30A0A087WSZ9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
TRAV30A0A087WSZ9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV30A0A087WSZ9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAV30A0A087WSZ9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV30A0A087WSZ9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV30A0A087WSZ9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV30A0A087WSZ9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV30A0A087WSZ9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV30A0A087WSZ9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV30A0A087WSZ9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV30A0A087WSZ9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV30A0A087WSZ9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRAV30A0A087WSZ9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV30A0A087WSZ9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV30A0A087WSZ9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV30A0A087WSZ9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRAV30A0A087WSZ9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV30A0A087WSZ9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV30A0A087WSZ9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV30A0A087WSZ9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV30A0A087WSZ9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV30A0A087WSZ9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 AC110285.7-201ENST00000624417 1536 ntBASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 DUX4L29-201ENST00000425409 679 ntBASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRAV30A0A087WSZ9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV30A0A087WSZ9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV30A0A087WSZ9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms