RNA–Protein interactions for RNA: ENST00000641713.1

CCDC196-210, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,464 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-210ENST00000641713 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
CCDC196-210ENST00000641713 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
CCDC196-210ENST00000641713 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
CCDC196-210ENST00000641713 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
CCDC196-210ENST00000641713 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
CCDC196-210ENST00000641713 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.06
CCDC196-210ENST00000641713 CCDC180Q9P1Z9 1646 aa15.36■□□□□ 0.05
CCDC196-210ENST00000641713 ABCC9O60706 1549 aa15.34■□□□□ 0.05
CCDC196-210ENST00000641713 FOXD1Q16676 465 aa14.7□□□□□ -0.06
CCDC196-210ENST00000641713 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
CCDC196-210ENST00000641713 ADRA2BP18089 450 aa14.51□□□□□ -0.09
CCDC196-210ENST00000641713 NACADO15069 1562 aa14.51□□□□□ -0.09
CCDC196-210ENST00000641713 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.09
CCDC196-210ENST00000641713 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
CCDC196-210ENST00000641713 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
CCDC196-210ENST00000641713 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
CCDC196-210ENST00000641713 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
CCDC196-210ENST00000641713 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
CCDC196-210ENST00000641713 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC196-210ENST00000641713 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
CCDC196-210ENST00000641713 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
CCDC196-210ENST00000641713 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
CCDC196-210ENST00000641713 PIAS4Q8N2W9 510 aaPredicted RBP14.02□□□□□ -0.16
CCDC196-210ENST00000641713 SCRIBQ14160 1630 aa14□□□□□ -0.17
CCDC196-210ENST00000641713 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
CCDC196-210ENST00000641713 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
CCDC196-210ENST00000641713 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
CCDC196-210ENST00000641713 CECR2Q9BXF3 1484 aa13.81□□□□□ -0.2
CCDC196-210ENST00000641713 KCNA4P22459 653 aa13.8□□□□□ -0.2
CCDC196-210ENST00000641713 PPP4R3CPQ6ZMV5 832 aa13.67□□□□□ -0.22
CCDC196-210ENST00000641713 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
CCDC196-210ENST00000641713 MSH5O43196 834 aa13.42□□□□□ -0.26
CCDC196-210ENST00000641713 NCAPD3P42695 1498 aa13.37□□□□□ -0.27
CCDC196-210ENST00000641713 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
CCDC196-210ENST00000641713 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
CCDC196-210ENST00000641713 ATAD2BQ9ULI0 1458 aa13.35□□□□□ -0.27
CCDC196-210ENST00000641713 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
CCDC196-210ENST00000641713 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
CCDC196-210ENST00000641713 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
CCDC196-210ENST00000641713 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.28
CCDC196-210ENST00000641713 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
CCDC196-210ENST00000641713 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
CCDC196-210ENST00000641713 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
CCDC196-210ENST00000641713 CUX2O14529 1486 aa13.21□□□□□ -0.29
CCDC196-210ENST00000641713 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.3
CCDC196-210ENST00000641713 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
CCDC196-210ENST00000641713 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
CCDC196-210ENST00000641713 NESP48681 1621 aa13.18□□□□□ -0.3
CCDC196-210ENST00000641713 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
CCDC196-210ENST00000641713 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
CCDC196-210ENST00000641713 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
CCDC196-210ENST00000641713 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
CCDC196-210ENST00000641713 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
CCDC196-210ENST00000641713 WIZO95785 1651 aa13.03□□□□□ -0.32
CCDC196-210ENST00000641713 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
CCDC196-210ENST00000641713 PDS5BQ9NTI5 1447 aa13□□□□□ -0.33
CCDC196-210ENST00000641713 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
CCDC196-210ENST00000641713 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
CCDC196-210ENST00000641713 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
CCDC196-210ENST00000641713 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
CCDC196-210ENST00000641713 WDR62O43379 1518 aa12.86□□□□□ -0.35
CCDC196-210ENST00000641713 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
CCDC196-210ENST00000641713 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
CCDC196-210ENST00000641713 FANCD2Q9BXW9 1451 aa12.84□□□□□ -0.35
CCDC196-210ENST00000641713 CFTRP13569 1480 aa12.83□□□□□ -0.36
CCDC196-210ENST00000641713 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
CCDC196-210ENST00000641713 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
CCDC196-210ENST00000641713 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
CCDC196-210ENST00000641713 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
CCDC196-210ENST00000641713 CCDC88BA6NC98 1476 aa12.7□□□□□ -0.38
CCDC196-210ENST00000641713 ZBTB22O15209 634 aa12.67□□□□□ -0.38
CCDC196-210ENST00000641713 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
CCDC196-210ENST00000641713 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
CCDC196-210ENST00000641713 TOPBP1Q92547 1522 aa12.6□□□□□ -0.39
CCDC196-210ENST00000641713 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
CCDC196-210ENST00000641713 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
CCDC196-210ENST00000641713 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
CCDC196-210ENST00000641713 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
CCDC196-210ENST00000641713 ABCC8Q09428 1581 aa12.55□□□□□ -0.4
CCDC196-210ENST00000641713 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
CCDC196-210ENST00000641713 EIF4G3O43432 1585 aaKnown RBP12.52□□□□□ -0.41
CCDC196-210ENST00000641713 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
CCDC196-210ENST00000641713 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.41
CCDC196-210ENST00000641713 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.41
CCDC196-210ENST00000641713 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.41
CCDC196-210ENST00000641713 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.41
CCDC196-210ENST00000641713 AQRO60306 1485 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC196-210ENST00000641713 CHD1O14646 1710 aa12.43□□□□□ -0.42
CCDC196-210ENST00000641713 RAD54L2Q9Y4B4 1467 aa12.42□□□□□ -0.42
CCDC196-210ENST00000641713 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
CCDC196-210ENST00000641713 SOGA1O94964 1423 aa12.4□□□□□ -0.42
CCDC196-210ENST00000641713 FGD5Q6ZNL6 1462 aa12.39□□□□□ -0.43
CCDC196-210ENST00000641713 CUX1P39880 1505 aa12.39□□□□□ -0.43
CCDC196-210ENST00000641713 FBLN2P98095 1184 aa12.38□□□□□ -0.43
CCDC196-210ENST00000641713 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
CCDC196-210ENST00000641713 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
CCDC196-210ENST00000641713 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
CCDC196-210ENST00000641713 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
CCDC196-210ENST00000641713 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
CCDC196-210ENST00000641713 CYB5RLQ6IPT4 315 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms