RNA–Protein interactions for RNA: ENST00000641477.1

CALR4P-204, Transcript of calreticulin 4, pseudogene, humanhuman

Gene CALR4P, Length 1,943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR4P-204ENST00000641477 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
CALR4P-204ENST00000641477 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
CALR4P-204ENST00000641477 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
CALR4P-204ENST00000641477 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
CALR4P-204ENST00000641477 CCDC180Q9P1Z9 1646 aa14.34□□□□□ -0.11
CALR4P-204ENST00000641477 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
CALR4P-204ENST00000641477 ABCC9O60706 1549 aa13.58□□□□□ -0.24
CALR4P-204ENST00000641477 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.25
CALR4P-204ENST00000641477 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
CALR4P-204ENST00000641477 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
CALR4P-204ENST00000641477 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
CALR4P-204ENST00000641477 NACADO15069 1562 aa13.33□□□□□ -0.28
CALR4P-204ENST00000641477 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
CALR4P-204ENST00000641477 RB1CC1Q8TDY2 1594 aa13.25□□□□□ -0.29
CALR4P-204ENST00000641477 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
CALR4P-204ENST00000641477 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
CALR4P-204ENST00000641477 SENP3Q9H4L4 574 aaPredicted RBP13.01□□□□□ -0.33
CALR4P-204ENST00000641477 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
CALR4P-204ENST00000641477 BICRAQ9NZM4 1560 aa12.83□□□□□ -0.36
CALR4P-204ENST00000641477 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
CALR4P-204ENST00000641477 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
CALR4P-204ENST00000641477 ADRA2BP18089 450 aa12.7□□□□□ -0.38
CALR4P-204ENST00000641477 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
CALR4P-204ENST00000641477 MYT1Q01538 1121 aa12.66□□□□□ -0.38
CALR4P-204ENST00000641477 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
CALR4P-204ENST00000641477 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
CALR4P-204ENST00000641477 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
CALR4P-204ENST00000641477 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
CALR4P-204ENST00000641477 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
CALR4P-204ENST00000641477 KCNA4P22459 653 aa12.6□□□□□ -0.39
CALR4P-204ENST00000641477 WIZO95785 1651 aa12.55□□□□□ -0.4
CALR4P-204ENST00000641477 TTBK1Q5TCY1 1321 aaPredicted RBP12.52□□□□□ -0.4
CALR4P-204ENST00000641477 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
CALR4P-204ENST00000641477 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
CALR4P-204ENST00000641477 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.42
CALR4P-204ENST00000641477 PEG3Q9GZU2 1588 aa12.44□□□□□ -0.42
CALR4P-204ENST00000641477 DAXXQ9UER7 740 aaPredicted RBP12.43□□□□□ -0.42
CALR4P-204ENST00000641477 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
CALR4P-204ENST00000641477 SMARCA2P51531 1590 aa12.4□□□□□ -0.42
CALR4P-204ENST00000641477 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
CALR4P-204ENST00000641477 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
CALR4P-204ENST00000641477 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
CALR4P-204ENST00000641477 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
CALR4P-204ENST00000641477 NCAPD3P42695 1498 aa12.27□□□□□ -0.45
CALR4P-204ENST00000641477 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
CALR4P-204ENST00000641477 FOXD1Q16676 465 aa12.19□□□□□ -0.46
CALR4P-204ENST00000641477 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
CALR4P-204ENST00000641477 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
CALR4P-204ENST00000641477 APLP2Q06481 763 aa12.18□□□□□ -0.46
CALR4P-204ENST00000641477 ERICH6Q7L0X2 663 aa12.17□□□□□ -0.46
CALR4P-204ENST00000641477 HRCP23327 699 aa12.07□□□□□ -0.48
CALR4P-204ENST00000641477 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
CALR4P-204ENST00000641477 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
CALR4P-204ENST00000641477 CFTRP13569 1480 aa12□□□□□ -0.49
CALR4P-204ENST00000641477 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
CALR4P-204ENST00000641477 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
CALR4P-204ENST00000641477 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
CALR4P-204ENST00000641477 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
CALR4P-204ENST00000641477 WRNQ14191 1432 aaPredicted RBP eCLIP11.93□□□□□ -0.5
CALR4P-204ENST00000641477 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
CALR4P-204ENST00000641477 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
CALR4P-204ENST00000641477 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
CALR4P-204ENST00000641477 SYNJ1O43426 1573 aa11.91□□□□□ -0.5
CALR4P-204ENST00000641477 NESP48681 1621 aa11.9□□□□□ -0.51
CALR4P-204ENST00000641477 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
CALR4P-204ENST00000641477 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
CALR4P-204ENST00000641477 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
CALR4P-204ENST00000641477 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
CALR4P-204ENST00000641477 CUX1P39880 1505 aa11.82□□□□□ -0.52
CALR4P-204ENST00000641477 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
CALR4P-204ENST00000641477 KIF21AQ7Z4S6 1674 aa11.8□□□□□ -0.52
CALR4P-204ENST00000641477 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
CALR4P-204ENST00000641477 FAM9AQ8IZU1 332 aaPredicted RBP11.76□□□□□ -0.53
CALR4P-204ENST00000641477 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
CALR4P-204ENST00000641477 SOGA1O94964 1423 aa11.75□□□□□ -0.53
CALR4P-204ENST00000641477 ZBTB22O15209 634 aa11.72□□□□□ -0.53
CALR4P-204ENST00000641477 EEA1Q15075 1411 aa11.72□□□□□ -0.53
CALR4P-204ENST00000641477 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
CALR4P-204ENST00000641477 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.53
CALR4P-204ENST00000641477 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
CALR4P-204ENST00000641477 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
CALR4P-204ENST00000641477 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
CALR4P-204ENST00000641477 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
CALR4P-204ENST00000641477 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
CALR4P-204ENST00000641477 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
CALR4P-204ENST00000641477 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
CALR4P-204ENST00000641477 LOC105371045A0A1W2PR82 267 aa11.65□□□□□ -0.54
CALR4P-204ENST00000641477 KIF27Q86VH2 1401 aa11.63□□□□□ -0.55
CALR4P-204ENST00000641477 WDR62O43379 1518 aa11.62□□□□□ -0.55
CALR4P-204ENST00000641477 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
CALR4P-204ENST00000641477 CUX2O14529 1486 aa11.62□□□□□ -0.55
CALR4P-204ENST00000641477 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
CALR4P-204ENST00000641477 RAD54L2Q9Y4B4 1467 aa11.61□□□□□ -0.55
CALR4P-204ENST00000641477 KIF21BO75037 1637 aa11.6□□□□□ -0.55
CALR4P-204ENST00000641477 ARXQ96QS3 562 aa11.6□□□□□ -0.55
CALR4P-204ENST00000641477 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
CALR4P-204ENST00000641477 PIAS4Q8N2W9 510 aaPredicted RBP11.59□□□□□ -0.55
CALR4P-204ENST00000641477 ZEB1P37275 1124 aaPredicted RBP11.58□□□□□ -0.56
CALR4P-204ENST00000641477 TRIM26Q12899 539 aaPredicted RBP11.58□□□□□ -0.56
CALR4P-204ENST00000641477 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms