RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
SLC35A3-220ENST00000640360 SHROOM4Q9ULL8 1493 aa19.12■□□□□ 0.65
SLC35A3-220ENST00000640360 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
SLC35A3-220ENST00000640360 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
SLC35A3-220ENST00000640360 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
SLC35A3-220ENST00000640360 PCGF6Q9BYE7 350 aa17.87■□□□□ 0.45
SLC35A3-220ENST00000640360 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
SLC35A3-220ENST00000640360 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.45
SLC35A3-220ENST00000640360 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.44
SLC35A3-220ENST00000640360 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
SLC35A3-220ENST00000640360 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
SLC35A3-220ENST00000640360 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
SLC35A3-220ENST00000640360 HRCP23327 699 aa17.42■□□□□ 0.38
SLC35A3-220ENST00000640360 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
SLC35A3-220ENST00000640360 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
SLC35A3-220ENST00000640360 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
SLC35A3-220ENST00000640360 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
SLC35A3-220ENST00000640360 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
SLC35A3-220ENST00000640360 ABCC9O60706 1549 aa16.86■□□□□ 0.29
SLC35A3-220ENST00000640360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
SLC35A3-220ENST00000640360 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
SLC35A3-220ENST00000640360 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
SLC35A3-220ENST00000640360 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
SLC35A3-220ENST00000640360 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
SLC35A3-220ENST00000640360 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
SLC35A3-220ENST00000640360 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
SLC35A3-220ENST00000640360 CCER1Q8TC90 406 aaPredicted RBP16.52■□□□□ 0.24
SLC35A3-220ENST00000640360 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
SLC35A3-220ENST00000640360 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
SLC35A3-220ENST00000640360 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
SLC35A3-220ENST00000640360 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
SLC35A3-220ENST00000640360 WIZO95785 1651 aa16.37■□□□□ 0.21
SLC35A3-220ENST00000640360 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.21
SLC35A3-220ENST00000640360 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
SLC35A3-220ENST00000640360 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
SLC35A3-220ENST00000640360 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
SLC35A3-220ENST00000640360 SOGA1O94964 1423 aa16.24■□□□□ 0.19
SLC35A3-220ENST00000640360 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
SLC35A3-220ENST00000640360 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
SLC35A3-220ENST00000640360 DIEXFQ68CQ4 756 aaKnown RBP16.16■□□□□ 0.18
SLC35A3-220ENST00000640360 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
SLC35A3-220ENST00000640360 ITGAEP38570 1179 aa16.06■□□□□ 0.16
SLC35A3-220ENST00000640360 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
SLC35A3-220ENST00000640360 CEP162Q5TB80 1403 aa16■□□□□ 0.15
SLC35A3-220ENST00000640360 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
SLC35A3-220ENST00000640360 MIER1Q8N108 512 aa15.95■□□□□ 0.14
SLC35A3-220ENST00000640360 NACADO15069 1562 aa15.86■□□□□ 0.13
SLC35A3-220ENST00000640360 ATP1B4Q9UN42 357 aaPredicted RBP15.82■□□□□ 0.12
SLC35A3-220ENST00000640360 APLP2Q06481 763 aa15.82■□□□□ 0.12
SLC35A3-220ENST00000640360 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
SLC35A3-220ENST00000640360 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
SLC35A3-220ENST00000640360 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
SLC35A3-220ENST00000640360 HIRIP3Q9BW71 556 aaPredicted RBP15.78■□□□□ 0.12
SLC35A3-220ENST00000640360 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
SLC35A3-220ENST00000640360 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
SLC35A3-220ENST00000640360 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
SLC35A3-220ENST00000640360 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
SLC35A3-220ENST00000640360 SMARCA4P51532 1647 aa15.72■□□□□ 0.11
SLC35A3-220ENST00000640360 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
SLC35A3-220ENST00000640360 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
SLC35A3-220ENST00000640360 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
SLC35A3-220ENST00000640360 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
SLC35A3-220ENST00000640360 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
SLC35A3-220ENST00000640360 CLIP1P30622 1438 aa15.67■□□□□ 0.1
SLC35A3-220ENST00000640360 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
SLC35A3-220ENST00000640360 BCANQ96GW7 911 aa15.62■□□□□ 0.09
SLC35A3-220ENST00000640360 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
SLC35A3-220ENST00000640360 GOLGA3Q08378 1498 aa15.58■□□□□ 0.08
SLC35A3-220ENST00000640360 ARID3CA6NKF2 412 aa15.54■□□□□ 0.08
SLC35A3-220ENST00000640360 SIN3AQ96ST3 1273 aa15.53■□□□□ 0.08
SLC35A3-220ENST00000640360 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
SLC35A3-220ENST00000640360 CNGB1Q14028 1251 aaPredicted RBP15.51■□□□□ 0.07
SLC35A3-220ENST00000640360 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
SLC35A3-220ENST00000640360 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
SLC35A3-220ENST00000640360 SENP3-EIF4A1A0A087X0R7 540 aa15.46■□□□□ 0.07
SLC35A3-220ENST00000640360 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
SLC35A3-220ENST00000640360 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
SLC35A3-220ENST00000640360 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
SLC35A3-220ENST00000640360 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
SLC35A3-220ENST00000640360 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
SLC35A3-220ENST00000640360 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
SLC35A3-220ENST00000640360 KIF21BO75037 1637 aa15.37■□□□□ 0.05
SLC35A3-220ENST00000640360 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
SLC35A3-220ENST00000640360 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
SLC35A3-220ENST00000640360 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
SLC35A3-220ENST00000640360 EEA1Q15075 1411 aa15.31■□□□□ 0.04
SLC35A3-220ENST00000640360 SUPT16HQ9Y5B9 1047 aaKnown RBP15.29■□□□□ 0.04
SLC35A3-220ENST00000640360 IRX6P78412 446 aaPredicted RBP15.29■□□□□ 0.04
SLC35A3-220ENST00000640360 CHIC2Q9UKJ5 165 aa15.26■□□□□ 0.03
SLC35A3-220ENST00000640360 RAB3GAP2Q9H2M9 1393 aa15.22■□□□□ 0.03
SLC35A3-220ENST00000640360 FKBP8Q14318 412 aa15.2■□□□□ 0.02
SLC35A3-220ENST00000640360 FOXD1Q16676 465 aa15.2■□□□□ 0.02
SLC35A3-220ENST00000640360 CUX1P39880 1505 aa15.19■□□□□ 0.02
SLC35A3-220ENST00000640360 CUX2O14529 1486 aa15.19■□□□□ 0.02
SLC35A3-220ENST00000640360 CCNB3Q8WWL7 1395 aa15.19■□□□□ 0.02
SLC35A3-220ENST00000640360 PHLDB1Q86UU1 1377 aa15.16■□□□□ 0.02
SLC35A3-220ENST00000640360 ARHGAP35Q9NRY4 1499 aa15.15■□□□□ 0.02
SLC35A3-220ENST00000640360 RRP7BPQ9NSQ0 103 aa15.14■□□□□ 0.01
SLC35A3-220ENST00000640360 KIF27Q86VH2 1401 aa15.13■□□□□ 0.01
SLC35A3-220ENST00000640360 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms