RNA–Protein interactions for RNA: ENST00000640021.1

NOTCH2-208, Transcript of notch 2, humanhuman

TSL 5

Gene NOTCH2, Length 2,058 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-208ENST00000640021 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
NOTCH2-208ENST00000640021 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
NOTCH2-208ENST00000640021 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
NOTCH2-208ENST00000640021 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
NOTCH2-208ENST00000640021 SUPT5HO00267 1087 aaKnown RBP21.3■■□□□ 1
NOTCH2-208ENST00000640021 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
NOTCH2-208ENST00000640021 DCAF8L2P0C7V8 631 aa21.11■□□□□ 0.97
NOTCH2-208ENST00000640021 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
NOTCH2-208ENST00000640021 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
NOTCH2-208ENST00000640021 ABCC9O60706 1549 aa20.46■□□□□ 0.87
NOTCH2-208ENST00000640021 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
NOTCH2-208ENST00000640021 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
NOTCH2-208ENST00000640021 NACADO15069 1562 aa20.21■□□□□ 0.83
NOTCH2-208ENST00000640021 HRCP23327 699 aa20.15■□□□□ 0.82
NOTCH2-208ENST00000640021 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
NOTCH2-208ENST00000640021 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
NOTCH2-208ENST00000640021 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
NOTCH2-208ENST00000640021 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
NOTCH2-208ENST00000640021 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
NOTCH2-208ENST00000640021 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
NOTCH2-208ENST00000640021 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
NOTCH2-208ENST00000640021 WIZO95785 1651 aa19.77■□□□□ 0.76
NOTCH2-208ENST00000640021 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
NOTCH2-208ENST00000640021 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.74
NOTCH2-208ENST00000640021 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.72
NOTCH2-208ENST00000640021 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
NOTCH2-208ENST00000640021 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
NOTCH2-208ENST00000640021 SMARCA4P51532 1647 aa19.52■□□□□ 0.72
NOTCH2-208ENST00000640021 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.72
NOTCH2-208ENST00000640021 ZEB1P37275 1124 aaPredicted RBP19.47■□□□□ 0.71
NOTCH2-208ENST00000640021 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.69
NOTCH2-208ENST00000640021 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
NOTCH2-208ENST00000640021 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
NOTCH2-208ENST00000640021 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
NOTCH2-208ENST00000640021 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
NOTCH2-208ENST00000640021 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
NOTCH2-208ENST00000640021 EEA1Q15075 1411 aa19.18■□□□□ 0.66
NOTCH2-208ENST00000640021 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
NOTCH2-208ENST00000640021 WRNQ14191 1432 aaPredicted RBP eCLIP19.11■□□□□ 0.65
NOTCH2-208ENST00000640021 SOGA1O94964 1423 aa19.1■□□□□ 0.65
NOTCH2-208ENST00000640021 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
NOTCH2-208ENST00000640021 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
NOTCH2-208ENST00000640021 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
NOTCH2-208ENST00000640021 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
NOTCH2-208ENST00000640021 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
NOTCH2-208ENST00000640021 RUSC2Q8N2Y8 1516 aa18.98■□□□□ 0.63
NOTCH2-208ENST00000640021 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
NOTCH2-208ENST00000640021 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
NOTCH2-208ENST00000640021 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
NOTCH2-208ENST00000640021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
NOTCH2-208ENST00000640021 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
NOTCH2-208ENST00000640021 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
NOTCH2-208ENST00000640021 KIF21BO75037 1637 aa18.88■□□□□ 0.61
NOTCH2-208ENST00000640021 TTBK1Q5TCY1 1321 aaPredicted RBP18.8■□□□□ 0.6
NOTCH2-208ENST00000640021 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
NOTCH2-208ENST00000640021 CLIP1P30622 1438 aa18.73■□□□□ 0.59
NOTCH2-208ENST00000640021 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
NOTCH2-208ENST00000640021 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
NOTCH2-208ENST00000640021 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
NOTCH2-208ENST00000640021 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
NOTCH2-208ENST00000640021 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
NOTCH2-208ENST00000640021 APLP2Q06481 763 aa18.63■□□□□ 0.57
NOTCH2-208ENST00000640021 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
NOTCH2-208ENST00000640021 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
NOTCH2-208ENST00000640021 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
NOTCH2-208ENST00000640021 CUX1P39880 1505 aa18.5■□□□□ 0.55
NOTCH2-208ENST00000640021 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
NOTCH2-208ENST00000640021 CFTRP13569 1480 aa18.49■□□□□ 0.55
NOTCH2-208ENST00000640021 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
NOTCH2-208ENST00000640021 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
NOTCH2-208ENST00000640021 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
NOTCH2-208ENST00000640021 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
NOTCH2-208ENST00000640021 PRDM2Q13029 1718 aa18.45■□□□□ 0.54
NOTCH2-208ENST00000640021 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
NOTCH2-208ENST00000640021 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
NOTCH2-208ENST00000640021 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
NOTCH2-208ENST00000640021 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
NOTCH2-208ENST00000640021 PELP1Q8IZL8 1130 aaKnown RBP18.31■□□□□ 0.52
NOTCH2-208ENST00000640021 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
NOTCH2-208ENST00000640021 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
NOTCH2-208ENST00000640021 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
NOTCH2-208ENST00000640021 CUX2O14529 1486 aa18.25■□□□□ 0.51
NOTCH2-208ENST00000640021 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
NOTCH2-208ENST00000640021 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
NOTCH2-208ENST00000640021 IGF1RP08069 1367 aa18.22■□□□□ 0.51
NOTCH2-208ENST00000640021 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
NOTCH2-208ENST00000640021 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
NOTCH2-208ENST00000640021 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
NOTCH2-208ENST00000640021 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
NOTCH2-208ENST00000640021 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
NOTCH2-208ENST00000640021 MAP3K1Q13233 1512 aa18.15■□□□□ 0.5
NOTCH2-208ENST00000640021 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
NOTCH2-208ENST00000640021 MIER1Q8N108 512 aa18.11■□□□□ 0.49
NOTCH2-208ENST00000640021 TIAM1Q13009 1591 aa18.1■□□□□ 0.49
NOTCH2-208ENST00000640021 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
NOTCH2-208ENST00000640021 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
NOTCH2-208ENST00000640021 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
NOTCH2-208ENST00000640021 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
NOTCH2-208ENST00000640021 LRRC9Q6ZRR7 1453 aa18.02■□□□□ 0.48
NOTCH2-208ENST00000640021 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms