RNA–Protein interactions for RNA: ENST00000639302.1

CNTN2-222, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 4,318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-222ENST00000639302 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
CNTN2-222ENST00000639302 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
CNTN2-222ENST00000639302 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
CNTN2-222ENST00000639302 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
CNTN2-222ENST00000639302 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
CNTN2-222ENST00000639302 ABCC9O60706 1549 aa17.83■□□□□ 0.45
CNTN2-222ENST00000639302 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
CNTN2-222ENST00000639302 PCGF6Q9BYE7 350 aa17.33■□□□□ 0.37
CNTN2-222ENST00000639302 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
CNTN2-222ENST00000639302 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
CNTN2-222ENST00000639302 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
CNTN2-222ENST00000639302 LOC105371045A0A1W2PR82 267 aa17.1■□□□□ 0.33
CNTN2-222ENST00000639302 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
CNTN2-222ENST00000639302 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
CNTN2-222ENST00000639302 HRCP23327 699 aa16.91■□□□□ 0.3
CNTN2-222ENST00000639302 NACADO15069 1562 aa16.9■□□□□ 0.3
CNTN2-222ENST00000639302 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
CNTN2-222ENST00000639302 PPARGC1BQ86YN6 1023 aaKnown RBP16.87■□□□□ 0.29
CNTN2-222ENST00000639302 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
CNTN2-222ENST00000639302 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
CNTN2-222ENST00000639302 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
CNTN2-222ENST00000639302 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
CNTN2-222ENST00000639302 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
CNTN2-222ENST00000639302 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
CNTN2-222ENST00000639302 CCER1Q8TC90 406 aaPredicted RBP16.36■□□□□ 0.21
CNTN2-222ENST00000639302 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.21
CNTN2-222ENST00000639302 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
CNTN2-222ENST00000639302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
CNTN2-222ENST00000639302 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
CNTN2-222ENST00000639302 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
CNTN2-222ENST00000639302 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
CNTN2-222ENST00000639302 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
CNTN2-222ENST00000639302 APLP2Q06481 763 aa16.11■□□□□ 0.17
CNTN2-222ENST00000639302 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.15
CNTN2-222ENST00000639302 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.15
CNTN2-222ENST00000639302 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
CNTN2-222ENST00000639302 YTHDC1Q96MU7 727 aaKnown RBP15.96■□□□□ 0.15
CNTN2-222ENST00000639302 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
CNTN2-222ENST00000639302 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
CNTN2-222ENST00000639302 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
CNTN2-222ENST00000639302 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
CNTN2-222ENST00000639302 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
CNTN2-222ENST00000639302 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
CNTN2-222ENST00000639302 CENPBP07199 599 aaPredicted RBP15.84■□□□□ 0.13
CNTN2-222ENST00000639302 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
CNTN2-222ENST00000639302 WIZO95785 1651 aa15.83■□□□□ 0.13
CNTN2-222ENST00000639302 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
CNTN2-222ENST00000639302 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
CNTN2-222ENST00000639302 SMARCA2P51531 1590 aa15.78■□□□□ 0.12
CNTN2-222ENST00000639302 ITGAEP38570 1179 aa15.77■□□□□ 0.12
CNTN2-222ENST00000639302 ATP1B4Q9UN42 357 aaPredicted RBP15.77■□□□□ 0.12
CNTN2-222ENST00000639302 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
CNTN2-222ENST00000639302 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
CNTN2-222ENST00000639302 SOGA1O94964 1423 aa15.65■□□□□ 0.1
CNTN2-222ENST00000639302 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
CNTN2-222ENST00000639302 GTF3C3Q9Y5Q9 886 aa15.64■□□□□ 0.09
CNTN2-222ENST00000639302 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
CNTN2-222ENST00000639302 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
CNTN2-222ENST00000639302 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
CNTN2-222ENST00000639302 NEUROD1Q13562 356 aa15.6■□□□□ 0.09
CNTN2-222ENST00000639302 ACIN1Q9UKV3 1341 aaKnown RBP15.59■□□□□ 0.09
CNTN2-222ENST00000639302 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
CNTN2-222ENST00000639302 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
CNTN2-222ENST00000639302 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
CNTN2-222ENST00000639302 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
CNTN2-222ENST00000639302 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
CNTN2-222ENST00000639302 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
CNTN2-222ENST00000639302 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
CNTN2-222ENST00000639302 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
CNTN2-222ENST00000639302 CLIP1P30622 1438 aa15.43■□□□□ 0.06
CNTN2-222ENST00000639302 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
CNTN2-222ENST00000639302 NESP48681 1621 aa15.41■□□□□ 0.06
CNTN2-222ENST00000639302 MIER1Q8N108 512 aa15.4■□□□□ 0.06
CNTN2-222ENST00000639302 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
CNTN2-222ENST00000639302 FAM50AQ14320 339 aaKnown RBP15.39■□□□□ 0.05
CNTN2-222ENST00000639302 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
CNTN2-222ENST00000639302 EEA1Q15075 1411 aa15.34■□□□□ 0.05
CNTN2-222ENST00000639302 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
CNTN2-222ENST00000639302 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.03
CNTN2-222ENST00000639302 CFTRP13569 1480 aa15.25■□□□□ 0.03
CNTN2-222ENST00000639302 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
CNTN2-222ENST00000639302 FBLN2P98095 1184 aa15.2■□□□□ 0.02
CNTN2-222ENST00000639302 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
CNTN2-222ENST00000639302 BCANQ96GW7 911 aa15.16■□□□□ 0.02
CNTN2-222ENST00000639302 HIRIP3Q9BW71 556 aaPredicted RBP15.16■□□□□ 0.02
CNTN2-222ENST00000639302 MYT1Q01538 1121 aa15.15■□□□□ 0.02
CNTN2-222ENST00000639302 ARID3CA6NKF2 412 aa15.15■□□□□ 0.02
CNTN2-222ENST00000639302 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
CNTN2-222ENST00000639302 LAMC3Q9Y6N6 1575 aa15.13■□□□□ 0.01
CNTN2-222ENST00000639302 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
CNTN2-222ENST00000639302 DDX10Q13206 875 aaKnown RBP15.1■□□□□ 0.01
CNTN2-222ENST00000639302 NEFLP07196 543 aa15.06■□□□□ 0
CNTN2-222ENST00000639302 KIF27Q86VH2 1401 aa15.06■□□□□ 0
CNTN2-222ENST00000639302 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
CNTN2-222ENST00000639302 SIN3AQ96ST3 1273 aa15.04■□□□□ -0
CNTN2-222ENST00000639302 TRIM52Q96A61 297 aa15.03■□□□□ -0
CNTN2-222ENST00000639302 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
CNTN2-222ENST00000639302 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
CNTN2-222ENST00000639302 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
CNTN2-222ENST00000639302 CUX2O14529 1486 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms