RNA–Protein interactions for RNA: ENST00000638361.1

KCNMA1-234, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 4

Gene KCNMA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-234ENST00000638361 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
KCNMA1-234ENST00000638361 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
KCNMA1-234ENST00000638361 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
KCNMA1-234ENST00000638361 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
KCNMA1-234ENST00000638361 SENP3Q9H4L4 574 aaPredicted RBP20.88■□□□□ 0.93
KCNMA1-234ENST00000638361 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
KCNMA1-234ENST00000638361 FOXD1Q16676 465 aa19.46■□□□□ 0.71
KCNMA1-234ENST00000638361 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
KCNMA1-234ENST00000638361 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
KCNMA1-234ENST00000638361 ADRA2BP18089 450 aa19.11■□□□□ 0.65
KCNMA1-234ENST00000638361 ABCC9O60706 1549 aa18.52■□□□□ 0.56
KCNMA1-234ENST00000638361 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
KCNMA1-234ENST00000638361 KCNA4P22459 653 aa18.01■□□□□ 0.47
KCNMA1-234ENST00000638361 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
KCNMA1-234ENST00000638361 NACADO15069 1562 aa17.99■□□□□ 0.47
KCNMA1-234ENST00000638361 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
KCNMA1-234ENST00000638361 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
KCNMA1-234ENST00000638361 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
KCNMA1-234ENST00000638361 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
KCNMA1-234ENST00000638361 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
KCNMA1-234ENST00000638361 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
KCNMA1-234ENST00000638361 MSH5O43196 834 aa17.61■□□□□ 0.41
KCNMA1-234ENST00000638361 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
KCNMA1-234ENST00000638361 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
KCNMA1-234ENST00000638361 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
KCNMA1-234ENST00000638361 NPM3O75607 178 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-234ENST00000638361 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
KCNMA1-234ENST00000638361 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
KCNMA1-234ENST00000638361 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
KCNMA1-234ENST00000638361 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
KCNMA1-234ENST00000638361 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
KCNMA1-234ENST00000638361 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
KCNMA1-234ENST00000638361 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
KCNMA1-234ENST00000638361 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
KCNMA1-234ENST00000638361 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
KCNMA1-234ENST00000638361 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
KCNMA1-234ENST00000638361 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
KCNMA1-234ENST00000638361 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
KCNMA1-234ENST00000638361 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
KCNMA1-234ENST00000638361 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
KCNMA1-234ENST00000638361 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
KCNMA1-234ENST00000638361 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
KCNMA1-234ENST00000638361 ZBTB22O15209 634 aa16.65■□□□□ 0.26
KCNMA1-234ENST00000638361 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
KCNMA1-234ENST00000638361 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
KCNMA1-234ENST00000638361 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
KCNMA1-234ENST00000638361 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
KCNMA1-234ENST00000638361 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
KCNMA1-234ENST00000638361 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
KCNMA1-234ENST00000638361 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
KCNMA1-234ENST00000638361 WIZO95785 1651 aa16.46■□□□□ 0.23
KCNMA1-234ENST00000638361 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
KCNMA1-234ENST00000638361 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
KCNMA1-234ENST00000638361 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
KCNMA1-234ENST00000638361 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-234ENST00000638361 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
KCNMA1-234ENST00000638361 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
KCNMA1-234ENST00000638361 NESP48681 1621 aa16.08■□□□□ 0.17
KCNMA1-234ENST00000638361 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
KCNMA1-234ENST00000638361 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
KCNMA1-234ENST00000638361 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-234ENST00000638361 PRDM2Q13029 1718 aa16.04■□□□□ 0.16
KCNMA1-234ENST00000638361 CFTRP13569 1480 aa16.02■□□□□ 0.15
KCNMA1-234ENST00000638361 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
KCNMA1-234ENST00000638361 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
KCNMA1-234ENST00000638361 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
KCNMA1-234ENST00000638361 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
KCNMA1-234ENST00000638361 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
KCNMA1-234ENST00000638361 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
KCNMA1-234ENST00000638361 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
KCNMA1-234ENST00000638361 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
KCNMA1-234ENST00000638361 CUX2O14529 1486 aa15.81■□□□□ 0.12
KCNMA1-234ENST00000638361 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
KCNMA1-234ENST00000638361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.12
KCNMA1-234ENST00000638361 WDR62O43379 1518 aa15.78■□□□□ 0.12
KCNMA1-234ENST00000638361 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
KCNMA1-234ENST00000638361 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
KCNMA1-234ENST00000638361 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
KCNMA1-234ENST00000638361 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
KCNMA1-234ENST00000638361 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
KCNMA1-234ENST00000638361 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
KCNMA1-234ENST00000638361 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
KCNMA1-234ENST00000638361 CUX1P39880 1505 aa15.58■□□□□ 0.08
KCNMA1-234ENST00000638361 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
KCNMA1-234ENST00000638361 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
KCNMA1-234ENST00000638361 IFT140Q96RY7 1462 aa15.52■□□□□ 0.08
KCNMA1-234ENST00000638361 TOP2BQ02880 1626 aa15.52■□□□□ 0.08
KCNMA1-234ENST00000638361 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
KCNMA1-234ENST00000638361 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
KCNMA1-234ENST00000638361 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
KCNMA1-234ENST00000638361 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
KCNMA1-234ENST00000638361 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
KCNMA1-234ENST00000638361 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
KCNMA1-234ENST00000638361 SOGA1O94964 1423 aa15.43■□□□□ 0.06
KCNMA1-234ENST00000638361 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
KCNMA1-234ENST00000638361 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
KCNMA1-234ENST00000638361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
KCNMA1-234ENST00000638361 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
KCNMA1-234ENST00000638361 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
KCNMA1-234ENST00000638361 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms